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13_2_20cm_2_scaffold_3970

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3970_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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642..962
DNA (321bp) protein (107aa)
Preprotein translocase, YajC subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U9_9BACT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDY18152.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yajC; preprotein translocase subunit YajC
13_2_20cm_2_scaffold_3970_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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992..3379
DNA (2388bp) protein (796aa)
Protein-export membrane protein SecD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U8_9BACT
Protein-export membrane protein SecD {ECO:0000313|EMBL:EDY18151.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secD; preprotein translocase subunit SecD
13_2_20cm_2_scaffold_3970_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3492..3689
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI2_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
30S ribosomal protein S21
13_2_20cm_2_scaffold_3970_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3778..5202)
DNA (1425bp) protein (475aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH6_9BACT
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EDY22214.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
uroporphyrin-III C-methyltransferase
13_2_20cm_2_scaffold_3970_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5189..6148)
DNA (960bp) protein (320aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthonio
Porphobilinogen deaminase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X7_9BACT
hemC; porphobilinogen deaminase
13_2_20cm_2_scaffold_3970_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6198..7268)
DNA (1071bp) protein (357aa)
glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Glutamyl-tRNA reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN62_9BACT
glutamyl-tRNA reductase
13_2_20cm_2_scaffold_3970_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7265..8059)
DNA (795bp) protein (265aa)
Cytochrome c assembly protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X5_9BACT
Cytochrome c assembly protein {ECO:0000313|EMBL:EDY18178.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
cytochrome C biogenesis protein
13_2_20cm_2_scaffold_3970_8
unknown

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8170..9114
DNA (945bp) protein (315aa)

This feature has no annotations

13_2_20cm_2_scaffold_3970_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9145..9726
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Q0_9BACT
13_2_20cm_2_scaffold_3970_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9847..12618
DNA (2772bp) protein (924aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU94_9BACT
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00049024}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
glnD; UTP:GlnB (protein PII) uridylyltransferase
13_2_20cm_2_scaffold_3970_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12664..13416
DNA (753bp) protein (251aa)
Nucleotidyl transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D758_9BACT
Nucleotidyl transferase {ECO:0000313|EMBL:EDY17709.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
13_2_20cm_2_scaffold_3970_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13481..13900)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIH5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43062.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_3970_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13912..14685)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D641_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDY18244.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_2_scaffold_3970_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14780..15337)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D640_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18243.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_2_scaffold_3970_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15410..16033)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D638_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18241.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_2_scaffold_3970_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15976..16896)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D638_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18241.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_2_scaffold_3970_17

Not on your lists

comp(17257..19314)
DNA (2058bp) protein (686aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B70BDB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48716.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_2_scaffold_3970_18
unknown

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19546..19749
DNA (204bp) protein (68aa)

This feature has no annotations

13_2_20cm_2_scaffold_3970_trna_1
unknown

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19712..19784
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_3970_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19918..21843)
DNA (1926bp) protein (642aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyan
GAF sensor hybrid histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJF6_9BACT
diguanylate cyclase
Displaying 20 items

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