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13_1_40cm_scaffold_2710

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2710_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1702)
DNA (1701bp) protein (567aa)
Putative transmembrane sensor domain protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RUT4_SYNP3
transmembrane sensor domain-containing protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
transmembrane sensor domain-containing protein
13_1_40cm_scaffold_2710_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1711..2811)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAR7_9BACT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_1_40cm_scaffold_2710_3
unknown

Not on your lists

3437..3553
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_scaffold_2710_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4058..5182)
DNA (1125bp) protein (375aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC transporter (Permease proteine) id=3708844 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
13_1_40cm_scaffold_2710_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5187..6176)
DNA (990bp) protein (330aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP-binding protein) id=3708845 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2710_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6190..7332)
DNA (1143bp) protein (381aa)
secretion protein HlyD family protein; K01993 HlyD family secretion protein Tax=GWA2_Rokubacteria_73_35_curated
Secretion protein HlyD family protein id=3708846 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
secretion protein HlyD family protein
13_1_40cm_scaffold_2710_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7332..8090)
DNA (759bp) protein (253aa)
Zn-dependent protease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=3708847 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Zn-dependent protease
13_1_40cm_scaffold_2710_8
unknown

Not on your lists

8381..8617
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_2710_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8773..9828
DNA (1056bp) protein (352aa)
Serine protease Do id=3708848 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
serine protease Do Tax=GWA2_Rokubacteria_73_35_curated
serine protease Do
13_1_40cm_scaffold_2710_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9902..10603)
DNA (702bp) protein (234aa)
putative uracil-DNA glycosylase (EC:3.2.2.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase id=4954851 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_2710_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10633..11535
DNA (903bp) protein (301aa)
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asparaginase (EC:3.5.1.1)
Peptidase T2 asparaginase 2 id=3500033 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_2710_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11532..12743
DNA (1212bp) protein (404aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] id=14625075 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=CSP1_6_Rokubacteria
L-threonine ammonia-lyase (EC:4.3.1.19)
13_1_40cm_scaffold_2710_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

12740..13897
DNA (1158bp) protein (386aa)
Propanoyl-CoA C-acyltransferase {ECO:0000313|EMBL:EFH85539.1}; EC=2.3.1.176 {ECO:0000313|EMBL:EFH85539.1};; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobact
thiolase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D4C6EA
thiolase
13_1_40cm_scaffold_2710_14
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

13899..14315
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120C9_POLSJ
hypothetical protein; K07068 Tax=RBG_13_Chloroflexi_54_9_curated
hypothetical protein
13_1_40cm_scaffold_2710_15
unknown

Not on your lists

comp(14443..14673)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_scaffold_2710_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14753..15337)
DNA (585bp) protein (195aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=GWA2_Rokubacteria_73_35_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase id=3708850 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_40cm_scaffold_2710_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15446..15859)
DNA (414bp) protein (138aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=3708851 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TraR/DksA family transcriptional regulator
13_1_40cm_scaffold_2710_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(16332..16973)
DNA (642bp) protein (214aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14627315 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
ABC transporter-like protein
13_1_40cm_scaffold_2710_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16981..17706)
DNA (726bp) protein (242aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3061755 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter
13_1_40cm_scaffold_2710_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17703..18605)
DNA (903bp) protein (301aa)
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein id=14627317 bin=bin7_NC10_sister species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
13_1_40cm_scaffold_2710_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18602..19015)
DNA (414bp) protein (138aa)
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=14627318 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
branched-chain amino acid ABC transporter permease
Displaying 21 items

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