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13_1_40cm_4_scaffold_94

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_94_1

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comp(12..377)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM60376.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14427565 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_4_scaffold_94_trna_3
unknown

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comp(425..497)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_94_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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574..1968
DNA (1395bp) protein (465aa)
dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2] id=14427564 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=CSP1_1_Thaumarchaeota
pyrC; dihydroorotase, multifunctional complex type (EC:3.5.2.3)
13_1_40cm_4_scaffold_94_3

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comp(1960..2634)
DNA (675bp) protein (225aa)
Ribose 5-phosphate isomerase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYY2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM60378.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribose 5-phosphate isomerase
13_1_40cm_4_scaffold_94_4
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2635..3573)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCC5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81996.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_4_scaffold_94_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3749..3979)
DNA (231bp) protein (77aa)
Putative snRNP Sm-like protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR38_9ARCH
small nuclear ribonucleoprotein
Putative snRNP Sm-like protein {ECO:0000313|EMBL:CDI05102.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_4_scaffold_94_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4025..4753)
DNA (729bp) protein (243aa)
Creatininase (EC:3.5.2.10)
creatininase id=14427559 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
creatininase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_94_7

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comp(4750..5607)
DNA (858bp) protein (286aa)
Formyl transferase domain-containing protein (PurU) {ECO:0000313|EMBL:AIF00163.1}; EC=3.5.1.10 {ECO:0000313|EMBL:AIF00163.1};; TaxID=1455998 species="Archaea; Thaumarchaeota; environmental samples.;"
Putative formyltetrahydrofolate deformylase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EVB1_9ARCH
putative formyltetrahydrofolate deformylase
13_1_40cm_4_scaffold_94_trna_2
unknown

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comp(5955..6039)
DNA (85bp)
transferRNA
13_1_40cm_4_scaffold_94_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6047..7432
DNA (1386bp) protein (462aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14427557 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=CSP1_1_Thaumarchaeota
phosphoglucosamine mutase (EC:5.4.2.10)
13_1_40cm_4_scaffold_94_9

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7484..7879
DNA (396bp) protein (132aa)
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1502290 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Mari
rpl7ae; 50S ribosomal protein L7Ae id=14427556 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl7ae; 50S ribosomal protein L7Ae
13_1_40cm_4_scaffold_94_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7876..8082
DNA (207bp) protein (69aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
rps28e; 30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_4_scaffold_94_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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8295..8696
DNA (402bp) protein (134aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
ndk; nucleoside pyrophosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQX5_9ARCH
13_1_40cm_4_scaffold_94_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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8703..10484
DNA (1782bp) protein (594aa)
Putative translation initiation factor IF-2A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR70_9ARCH
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
infB; putative translation initiation factor IF-2
13_1_40cm_4_scaffold_94_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10481..10834)
DNA (354bp) protein (118aa)
Putative thioredoxin n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEH7_NITGG
trxA3; thioredoxin
Putative thioredoxin {ECO:0000313|EMBL:AFU59746.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gar
13_1_40cm_4_scaffold_94_14
uncultured marine crenarchaeote HF4000_APKG3H9, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10902..11294)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=3 Tax=environmental samples RepID=B3T460_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08599.1}; TaxID=455586 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000
archease protein family
13_1_40cm_4_scaffold_94_15

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11418..12689
DNA (1272bp) protein (424aa)
Histidyl-tRNA synthetase (HARS, hisS) {ECO:0000313|EMBL:AIF07840.1}; EC=6.1.1.21 {ECO:0000313|EMBL:AIF07840.1};; TaxID=1456103 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncult
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Putative tRNA synthetase class II core domain (G, H, P, S and T) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARH7_9ARCH
13_1_40cm_4_scaffold_94_16

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comp(12673..13344)
DNA (672bp) protein (224aa)
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1456097 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncu
translation initiation factor; K03264 translation initiation factor 6 id=14427536 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
translation initiation factor
13_1_40cm_4_scaffold_94_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13422..13874
DNA (453bp) protein (151aa)
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKJ0_NITGG
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AFU59517.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nit
13_1_40cm_4_scaffold_94_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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13916..14449
DNA (534bp) protein (178aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR83_9ARCH
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDI05127.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
4Fe-4S ferredoxin
13_1_40cm_4_scaffold_94_trna_1
unknown

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14567..14650
DNA (84bp)
transferRNA
13_1_40cm_4_scaffold_94_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(14654..15607)
DNA (954bp) protein (318aa)
Replication factor C small subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARU2_9ARCH
Replication factor C small subunit {ECO:0000313|EMBL:CDI05128.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
replication factor C
13_1_40cm_4_scaffold_94_20

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15809..16324
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL09925.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14427533 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
GINS complex protein
13_1_40cm_4_scaffold_94_21
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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16321..18402
DNA (2082bp) protein (694aa)
MCM family protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKY9_9ARCH
ATPase, AAA family {ECO:0000313|EMBL:EPA04309.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum l
MCM family protein
13_1_40cm_4_scaffold_94_22
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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18399..20525
DNA (2127bp) protein (709aa)
putative ski2-type helicase (EC:3.6.4.-)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae
DEAD/DEAH box helicase; K03726 helicase [EC:3.6.4.-] id=14427531 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_94_23
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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20522..21517
DNA (996bp) protein (332aa)
Glycosyl transferase family protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B7C0_9ARCH
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:AFS82038.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumi
13_1_40cm_4_scaffold_94_24
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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21514..21747
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3T5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80129.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_4_scaffold_94_25
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(21744..22220)
DNA (477bp) protein (159aa)
Putative bacterial transferase hexapeptide (Three repeats) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARF3_9ARCH
Putative bacterial transferase hexapeptide (Three repeats) {ECO:0000313|EMBL:CDI05134.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon
Acetyltransferase
13_1_40cm_4_scaffold_94_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22227..22496)
DNA (270bp) protein (90aa)
Uncharacterized protein family UPF0434/Trm112 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD1_NITGG
hypothetical protein
UPF0434 protein Ngar_c21050 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_4_scaffold_94_27
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22493..23428)
DNA (936bp) protein (312aa)
oxidoreductase domain-containing protein id=14427526 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
oxidoreductase domain-containing protein Tax=CSP1_1_Thaumarchaeota
oxidoreductase domain-containing protein
Displaying items 1-30 of 31 in total

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