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13_1_20cm_full_scaffold_502

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_502_1
unknown

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comp(1..369)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_full_scaffold_502_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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550..999
DNA (450bp) protein (150aa)
Arginine repressor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ARGR_SOLUE
ArgR family transcriptional regulator
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus
13_1_20cm_full_scaffold_502_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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996..2027
DNA (1032bp) protein (344aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372E71E rbh
13_1_20cm_full_scaffold_502_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2024..2875
DNA (852bp) protein (284aa)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ARGB_KORVE
acetylglutamate kinase
13_1_20cm_full_scaffold_502_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2875..4224
DNA (1350bp) protein (450aa)
argD; acetylornithine transaminase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023W8_SOLUE
13_1_20cm_full_scaffold_502_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

4229..4573
DNA (345bp) protein (115aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Ornithine carbamoyltransferase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JRE4_9GAMM
ornithine carbamoyltransferase
13_1_20cm_full_scaffold_502_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4570..5127
DNA (558bp) protein (186aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NF97_ROSCS
ornithine carbamoyltransferase
13_1_20cm_full_scaffold_502_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5233..6453
DNA (1221bp) protein (407aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argininosuccinate synthase (EC:6.3.4.5)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003786637
13_1_20cm_full_scaffold_502_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6496..7980
DNA (1485bp) protein (495aa)
argH; argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Argininosuccinate lyase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A1N6_THECD
argininosuccinate lyase
13_1_20cm_full_scaffold_502_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8080..9297
DNA (1218bp) protein (406aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPHIGHO2_01_FULL_Acidob
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein argJ n=1 Tax=mine drainage metagenome RepID=E6PZJ6_9ZZZZ
13_1_20cm_full_scaffold_502_11
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(9379..10995)
DNA (1617bp) protein (539aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEB10803.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEB10803.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marini
O-succinylbenzoate--CoA ligase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKP0_MARHT rbh
13_1_20cm_full_scaffold_502_12
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11129..11443)
DNA (315bp) protein (105aa)
transposase IS609 n=1 Tax=Massilia niastensis RepID=UPI0003775E23
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49327.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Meth
transposase, IS605 OrfB family
13_1_20cm_full_scaffold_502_13
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

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11701..12096
DNA (396bp) protein (132aa)
RNP-1 like RNA-binding protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TAI8_9PLAN
RNP-1 like RNA-binding protein Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
RNP-1 like RNA-binding protein
13_1_20cm_full_scaffold_502_14
unknown

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12482..12877
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_20cm_full_scaffold_502_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(12896..14575)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZV9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84806.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_20cm_full_scaffold_502_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

14778..15713
DNA (936bp) protein (312aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
radical SAM protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003817DB9
lipoyl synthase
13_1_20cm_full_scaffold_502_17
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15859..16086)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XE07_METSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT50782.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source=
13_1_20cm_full_scaffold_502_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16191..16442)
DNA (252bp) protein (84aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_full_scaffold_502_19
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(16531..16716)
DNA (186bp) protein (62aa)
cold-shock protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003664582
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
cold-shock DNA-binding protein family protein
13_1_20cm_full_scaffold_502_20
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16995..17444)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000371073A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32751.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_20cm_full_scaffold_502_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17441..18547)
DNA (1107bp) protein (369aa)
radical SAM protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003782B08
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABJ84520.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_1_20cm_full_scaffold_502_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

18851..21409
DNA (2559bp) protein (853aa)
AMP-dependent synthetase and ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMD0_KORVE
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
AMP-dependent synthetase/ligase
13_1_20cm_full_scaffold_502_23
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21433..22764
DNA (1332bp) protein (444aa)
Cellulase {ECO:0000313|EMBL:ADW67367.1}; EC=3.2.1.4 {ECO:0000313|EMBL:ADW67367.1};; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella
glycosyl hydrolase family 5 n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002886D47 rbh
peptidase family protein
Displaying 23 items

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