ggKbase home page

13_1_20cm_full_scaffold_550

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_550_1
unknown

Not on your lists

comp(1..276)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_full_scaffold_550_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

543..1136
DNA (594bp) protein (198aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSH5_GRAMM
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEU38551.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mal
13_1_20cm_full_scaffold_550_3
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1179..1892
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003760F86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU38550.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_1_20cm_full_scaffold_550_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2050..2808
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024J8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83578.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_20cm_full_scaffold_550_5
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2838..5279
DNA (2442bp) protein (814aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003743BE2 rbh
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEU38548.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicell
13_1_20cm_full_scaffold_550_6
unknown

Not on your lists

comp(5399..5578)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_full_scaffold_550_7
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

5998..7017
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Laceyella sacchari RepID=UPI0003B62F6D
Periplasmic serine proteases (ClpP class) Tax=CG_Elusi_05
Periplasmic serine proteases (ClpP class)
13_1_20cm_full_scaffold_550_8
unknown

Not on your lists

comp(6976..7254)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_full_scaffold_550_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7453..8184
DNA (732bp) protein (244aa)
IS1 transposase n=3 Tax=Mesorhizobium RepID=E8TJN7_MESCW
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
IS1 transposase
13_1_20cm_full_scaffold_550_10
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

Not on your lists

8315..9742
DNA (1428bp) protein (476aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TG13_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ57621.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physco
phospholipase C 4
13_1_20cm_full_scaffold_550_11
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

9759..11117
DNA (1359bp) protein (453aa)
id=12555210 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_20cm_full_scaffold_550_12
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(11284..12327)
DNA (1044bp) protein (348aa)
Putative L-carnitine dehydrogenase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMI1_9BACT
L-carnitine dehydrogenase Tax=RBG_16_Chloroflexi_47_49_curated
L-carnitine dehydrogenase
Displaying 12 items

View Taxonomy