ggKbase home page

13_1_20cm_full_scaffold_1640

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1640_1
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1737
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FKJ7_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU44735.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermuden
filamentous hemagglutinin outer membrane protein
13_1_20cm_full_scaffold_1640_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2156..3748
DNA (1593bp) protein (531aa)
Integral membrane protein MviN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D539_9BACT
virulence factor MviN; K03980 virulence factor Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
mviN1; virulence factor
13_1_20cm_full_scaffold_1640_3
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3756..4871)
DNA (1116bp) protein (372aa)
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WF89_9CYAN rbh
cystathionine beta-lyase/cystathionine gamma-synthase
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:AFZ18888.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Micr
13_1_20cm_full_scaffold_1640_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5066..6328
DNA (1263bp) protein (421aa)
Glutamate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5I8_9BACT rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_full_scaffold_1640_5
unknown

Not on your lists

6335..7282
DNA (948bp) protein (316aa)

This feature has no annotations

13_1_20cm_full_scaffold_1640_6
Jeotgalibacillus sp. D5, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7411..8325
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TH60_BACAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD92912.1}; TaxID=1508404 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus sp. D5.;"
13_1_20cm_full_scaffold_1640_7
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8397..9659
DNA (1263bp) protein (421aa)
fumarylacetoacetase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D9F964 rbh
Fumarylacetoacetase {ECO:0000313|EMBL:KEQ23009.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
fumarylacetoacetase
13_1_20cm_full_scaffold_1640_8
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9656..10249
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DF14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ95595.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
13_1_20cm_full_scaffold_1640_9
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10374..11048)
DNA (675bp) protein (225aa)
type 11 methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
Methyltransferase type 11 n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K6M4_9MYCO
type 11 methyltransferase
13_1_20cm_full_scaffold_1640_10
unknown

Not on your lists

comp(11055..11294)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_full_scaffold_1640_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11636..12976)
DNA (1341bp) protein (447aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=GWF2_Lentisphaerae_57_35_curated
glutamate dehydrogenase (EC:1.4.1.4)
glutamate dehydrogenase n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000364D531 rbh
13_1_20cm_full_scaffold_1640_trna_1
unknown

Not on your lists

comp(13121..13192)
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_1640_12

Not on your lists

13314..13766
DNA (453bp) protein (151aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNF9_SINAD
Marine sediment metagenome DNA, contig: S01H1_L05764 {ECO:0000313|EMBL:GAF67559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
redox protein, regulator of disulfide bond formation
13_1_20cm_full_scaffold_1640_13
unknown

Not on your lists

comp(13796..13897)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 14 items

View Taxonomy