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13_1_40cm_4_scaffold_558

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_558_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5..799)
DNA (795bp) protein (265aa)
Inositol-1-monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Inositol-1-monophosphatase (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z854_9GAMM
13_1_40cm_4_scaffold_558_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

829..1434
DNA (606bp) protein (202aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GD43_CHLAD
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_558_3
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

1434..2063
DNA (630bp) protein (210aa)
Putative uncharacterized protein id=4233077 bin=GWC2_Elusimicrobia_64_44 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein Tax=GWC2_Elusimicrobia_64_44_curated
13_1_40cm_4_scaffold_558_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2068..4803
DNA (2736bp) protein (912aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] id=14633067 bin=bin9_gal15 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
DNA polymerase I (EC:2.7.7.7)
13_1_40cm_4_scaffold_558_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5015..5656
DNA (642bp) protein (214aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=FPG_ROSS1
13_1_40cm_4_scaffold_558_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5653..7614
DNA (1962bp) protein (654aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USN5_ROSS1
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABQ89638.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
13_1_40cm_4_scaffold_558_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7617..8231
DNA (615bp) protein (205aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1A2_ROSS1
13_1_40cm_4_scaffold_558_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8221..9012)
DNA (792bp) protein (264aa)
Flp pilus assembly CpaB domain protein; K02279 pilus assembly protein CpaB Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Flp pilus assembly protein CpaB id=4733028 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Flp pilus assembly protein CpaB
13_1_40cm_4_scaffold_558_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9250..11376
DNA (2127bp) protein (709aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UvrABC system protein B id=4733031 bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
excinuclease ABC subunit B
13_1_40cm_4_scaffold_558_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11376..12080
DNA (705bp) protein (235aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_558_11
unknown

Not on your lists

12080..12775
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_40cm_4_scaffold_558_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12783..15671
DNA (2889bp) protein (963aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UvrABC system protein A id=4775408 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
excinuclease ABC subunit A
13_1_40cm_4_scaffold_558_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15851..16483
DNA (633bp) protein (211aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_558_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16485..16748
DNA (264bp) protein (88aa)
SCP-like extracellular n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4F3_SPHTD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_558_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16745..17026
DNA (282bp) protein (94aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
YqjV-like uncharacterized MFS-type transporter id=1984316 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_558_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17005..17964
DNA (960bp) protein (320aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
YqjV-like uncharacterized MFS-type transporter id=1984316 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protein of unknown function DUF894 DitE
13_1_40cm_4_scaffold_558_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18011..19438
DNA (1428bp) protein (476aa)
Integral membrane protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P920_9DELT
Integral membrane protein {ECO:0000313|EMBL:EPX60930.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
Protein of unknown function (DUF1222)
13_1_40cm_4_scaffold_558_18
unknown

Not on your lists

comp(19435..19587)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_558_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19705..21882)
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C960_SPHTD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACZ40353.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_558_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21879..23162)
DNA (1284bp) protein (428aa)
arsenical pump membrane protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Na+/H+ antiporter NhaD type id=4803671 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
citrate transporter
13_1_40cm_4_scaffold_558_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(23174..24475)
DNA (1302bp) protein (434aa)
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14625310 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_558_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(24475..25668)
DNA (1194bp) protein (398aa)
FAD linked oxidase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS84_RUBXD
FAD linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FAD linked oxidase-like protein
13_1_40cm_4_scaffold_558_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(25665..27014)
DNA (1350bp) protein (450aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG87_9CHLR
FAD linked oxidase domain-containing protein
13_1_40cm_4_scaffold_558_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(27116..27919)
DNA (804bp) protein (268aa)
Transcriptional regulator, IclR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A777_THECD
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
IclR family transcriptional regulator
13_1_40cm_4_scaffold_558_25
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(27971..28750)
DNA (780bp) protein (260aa)
id=14628372 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
13_1_40cm_4_scaffold_558_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

28793..30658
DNA (1866bp) protein (622aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UvrABC system protein C id=4775455 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
uvrC; excinuclease ABC subunit C
13_1_40cm_4_scaffold_558_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

30723..31091
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=Thermoanaerobacter RepID=I9AFR5_9THEO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_558_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

31091..32077
DNA (987bp) protein (329aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uncharacterized conserved secreted protein id=1892133 bin=GWD2_Chloroflexi_49_16 species=Idiomarina loihiensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
lipoprotein
13_1_40cm_4_scaffold_558_29
unknown

Not on your lists

32080..32487
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying 29 items

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