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13_1_40cm_2_scaffold_359

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_359_1

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comp(1..336)
DNA (336bp) protein (112aa)
ORC1-type DNA replication protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6J9_9ARCH
cell division control protein 6 family protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1456160 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_46_F12.;"
13_1_40cm_2_scaffold_359_2
unknown

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577..726
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_2_scaffold_359_3
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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976..1278
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Nitrosopumilus RepID=K0BF90_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83715.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_359_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1275..1433)
DNA (159bp) protein (53aa)
AbrB family transcriptional regulator id=14428102 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AbrB family transcriptional regulator Tax=CSP1_1_Thaumarchaeota
AbrB family transcriptional regulator
13_1_40cm_2_scaffold_359_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1571..2161)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVQ5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06634.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_359_6

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2680..3429
DNA (750bp) protein (250aa)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUU0_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM02371.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
geranylgeranylglyceryl phosphate synthase
13_1_40cm_2_scaffold_359_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3432..6806
DNA (3375bp) protein (1125aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] id=14428106 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CSP1_1_Thaumarchaeota
DNA polymerase II large subunit (EC:2.7.7.7)
13_1_40cm_2_scaffold_359_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6803..8221)
DNA (1419bp) protein (473aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVN1_9ARCH rbh
13_1_40cm_2_scaffold_359_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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8251..9948
DNA (1698bp) protein (566aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVP9_9ARCH rbh
Thermosome subunit {ECO:0000313|EMBL:CDI06629.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
thermosome
13_1_40cm_2_scaffold_359_10

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10002..10280
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E6A6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KER06808.1}; TaxID=1502292 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-
hypothetical protein
13_1_40cm_2_scaffold_359_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10277..11737)
DNA (1461bp) protein (487aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota
glnA; glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVL7_9ARCH rbh
13_1_40cm_2_scaffold_359_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11797..12354
DNA (558bp) protein (186aa)
hypothetical protein id=14428111 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_359_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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12381..12653
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVM8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06625.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_359_14

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12945..13733
DNA (789bp) protein (263aa)
putative enzyme (EC:1.-.-.-)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AIE98239.1}; TaxID=1455967 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_04_H06.;"
short-chain dehydrogenase/reductase SDR id=14428114 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_359_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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13758..14891
DNA (1134bp) protein (378aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVL5_9ARCH rbh
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CDI06622.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeo
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_2_scaffold_359_trna_1
unknown

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14965..15039
DNA (75bp)
transferRNA
13_1_40cm_2_scaffold_359_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15139..15447
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL20_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59267.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_2_scaffold_359_17
unknown

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15526..15819
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_359_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(15826..16434)
DNA (609bp) protein (203aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CDI06619.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CDI06619.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Tha
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVJ6_9ARCH
DNA-3-methyladenine glycosylase II
13_1_40cm_2_scaffold_359_19
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(16436..17674)
DNA (1239bp) protein (413aa)
Cation diffusion facilitator family transporter n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B2F7_9ARCH
cation diffusion facilitator family transporter
Cation-efflux pump FieF protein {ECO:0000313|EMBL:KFM19045.1}; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC
13_1_40cm_2_scaffold_359_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17716..18483)
DNA (768bp) protein (256aa)
Ser/Thr protein kinase id=14428117 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Ser/Thr protein kinase Tax=CSP1_1_Thaumarchaeota
Ser/Thr protein kinase
13_1_40cm_2_scaffold_359_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18455..19789)
DNA (1335bp) protein (445aa)
tRNA CCA-pyrophosphorylase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=14428118 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
tRNA CCA-pyrophosphorylase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=CSP1_1_Thaumarchaeota
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
13_1_40cm_2_scaffold_359_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19786..20325)
DNA (540bp) protein (180aa)
2'-5' RNA ligase id=14428119 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
2'-5' RNA ligase Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_359_23
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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20400..20948
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVG6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06615.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
dephospho-CoA kinase, CoaE
13_1_40cm_2_scaffold_359_24

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20945..21346
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8I13 RepID=B3TAY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK52685.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_2_scaffold_359_25
unknown

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comp(21419..21625)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 26 items

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