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13_1_40cm_scaffold_4527

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4527_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_4527_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(279..1511)
DNA (1233bp) protein (411aa)
zinc-dependent peptidase, M16 family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative peptidase id=1250270 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
zinc-dependent peptidase
13_1_40cm_scaffold_4527_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1804..2631)
DNA (828bp) protein (276aa)
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase/AP lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB70_GEMAT
13_1_40cm_scaffold_4527_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2615..3901)
DNA (1287bp) protein (429aa)
phosphoribosylamine/glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIW9_RHOM4
13_1_40cm_scaffold_4527_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3898..4899)
DNA (1002bp) protein (334aa)
Peptidase M48 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB68_GEMAT
peptidase M48 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M48 family protein
13_1_40cm_scaffold_4527_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5007..6176)
DNA (1170bp) protein (390aa)
metC; cystathionine beta-lyase (EC:4.4.1.8); K01758 cystathionine gamma-lyase [EC:4.4.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB67_GEMAT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_40cm_scaffold_4527_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6179..7228
DNA (1050bp) protein (350aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB66_GEMAT
putative two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_1_40cm_scaffold_4527_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7275..8711
DNA (1437bp) protein (479aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoglucosamine mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB64_GEMAT
Phosphoglucosamine mutase, archaeal-related protein
13_1_40cm_scaffold_4527_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8696..10528
DNA (1833bp) protein (611aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
13_1_40cm_scaffold_4527_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10532..10987
DNA (456bp) protein (152aa)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B603_THEAS
D-tyrosyl-tRNA(Tyr) deacylase Tax=GWC2_Gemmatimonadetes_71_10_curated
D-tyrosyl-tRNA(Tyr) deacylase
13_1_40cm_scaffold_4527_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10984..11571
DNA (588bp) protein (196aa)
Maf-like protein GAU_2420 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB56_GEMAT
maf; septum formation protein Maf
Maf-like protein GAU_2420 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_1_40cm_scaffold_4527_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11553..12617)
DNA (1065bp) protein (355aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Adenylate cyclase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB53_GEMAT
adenylyl cyclase class-3/4/guanylyl cyclase
13_1_40cm_scaffold_4527_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12593..13087)
DNA (495bp) protein (165aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cya; adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB53_GEMAT
13_1_40cm_scaffold_4527_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13103..14608)
DNA (1506bp) protein (502aa)
trpE; anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anthranilate synthase component I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB52_GEMAT
anthranilate synthase component I
13_1_40cm_scaffold_4527_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14605..15162)
DNA (558bp) protein (186aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_4527_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15208..17178
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A514_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_4527_17
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

17288..19069
DNA (1782bp) protein (594aa)
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RBG_16_Acidobacteria_68_9_curated
Response regulator receiver protein id=1943209 bin=GWB2_Elusimicrobium_63_22 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
ATPase involved in pili biogenesis
13_1_40cm_scaffold_4527_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19418..19948
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB51_GEMAT
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NUDIX hydrolase
13_1_40cm_scaffold_4527_19
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

19992..20381
DNA (390bp) protein (130aa)
Methylated-DNA--[protein]-cysteine S-methyltransferase, TIGR00589 family n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GEN3_9LEPT
methylated-DNA--protein-cysteine methyltransferase; K07443 methylated-DNA-protein-cysteine methyltransferase related protein Tax=CG_Anaero_02
Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein
13_1_40cm_scaffold_4527_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20303..22021)
DNA (1719bp) protein (573aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBT4_CHLAD
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_4527_21
unknown

Not on your lists

22111..22548
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_scaffold_4527_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22446..23078)
DNA (633bp) protein (211aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_4527_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23075..23518)
DNA (444bp) protein (148aa)
Probable GTP-binding protein EngB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENGB_GEMAT
ribosome biogenesis GTP-binding protein YsxC Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
engB; putative GTP-binding protein EngB
13_1_40cm_scaffold_4527_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23632..24837)
DNA (1206bp) protein (402aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB47_GEMAT
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP-dependent Clp protease ATP-binding subunit clpX
13_1_40cm_scaffold_4527_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24879..25496)
DNA (618bp) protein (206aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB46_GEMAT
ATP-dependent Clp protease proteolytic subunit
13_1_40cm_scaffold_4527_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25505..26746)
DNA (1242bp) protein (414aa)
Trigger factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB45_GEMAT
tig; trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Trigger factor
13_1_40cm_scaffold_4527_27
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27023..27436
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4C3D
Uncharacterized protein {ECO:0000313|EMBL:EAU68781.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
hypothetical protein
13_1_40cm_scaffold_4527_28
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27865..28584
DNA (720bp) protein (240aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Con
Beta-galactosidase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH25_THIV6
beta-galactosidase
Displaying 28 items

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