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13_1_40cm_scaffold_1276

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1276_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..984
DNA (984bp) protein (328aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TPR repeat-containing protein id=2268946 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_scaffold_1276_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

981..2675
DNA (1695bp) protein (565aa)
DNA mismatch repair protein MutL n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=MUTL_ANADF
DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_1276_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2698..3630
DNA (933bp) protein (311aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA dimethylallyltransferase
tRNA dimethylallyltransferase id=4853966 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1276_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3655..4800
DNA (1146bp) protein (382aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L4_GEMAT
13_1_40cm_scaffold_1276_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4793..5617
DNA (825bp) protein (275aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus sp. AM4 RepID=B7R272_9EURY
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase
13_1_40cm_scaffold_1276_6
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5614..6396
DNA (783bp) protein (261aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYM4_9FIRM
bacitracin resistance protein BacA
13_1_40cm_scaffold_1276_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6384..7142
DNA (759bp) protein (253aa)
biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_16_Gemmatimo
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L6_GEMAT
biotin/acetyl-CoA-carboxylase ligase
13_1_40cm_scaffold_1276_8
unknown

Not on your lists

7126..8046
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_40cm_scaffold_1276_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8054..8833
DNA (780bp) protein (260aa)
putative transcriptional acitvator, Baf family; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWC2_Gemmatimonadetes_71_10_curated
pantothenate kinase n=1 Tax=Meiothermus timidus RepID=UPI000372C9F3
putative Baf family transcriptional acitvator
13_1_40cm_scaffold_1276_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8830..9753
DNA (924bp) protein (308aa)
UbiA prenyltransferase; K04040 chlorophyll synthase [EC:2.5.1.62] Tax=GWC2_Gemmatimonadetes_71_10_curated
UbiA prenyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3A9_9BACT
UbiA prenyltransferase
13_1_40cm_scaffold_1276_11
unknown

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9886..10533
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_scaffold_1276_12
unknown

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10551..10835
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_1276_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10819..11808
DNA (990bp) protein (330aa)
NLP/P60 protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GDN8_9FIRM
cell wall-associated hydrolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
NLP/P60 protein
13_1_40cm_scaffold_1276_14
unknown

Not on your lists

11809..12228
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_scaffold_1276_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12360..12668
DNA (309bp) protein (103aa)
10 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH10_GEMAT
groES; 10 kDa chaperonin; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
10 kDa chaperonin
13_1_40cm_scaffold_1276_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12689..14320
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH60_GEMAT
groEL; 60 kDa chaperonin; K04077 chaperonin GroEL Tax=GWC2_Gemmatimonadetes_71_10_curated
60 kDa chaperonin
13_1_40cm_scaffold_1276_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14480..14956
DNA (477bp) protein (159aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_1276_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14961..16736)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X0_GEMAT
putative protein kinase
Uncharacterized protein {ECO:0000313|EMBL:BAH37280.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_1276_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16805..17974)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type
13_1_40cm_scaffold_1276_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17971..18981)
DNA (1011bp) protein (337aa)
manC; putative mannose-1-phosphate guanylyltransferase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative mannose-1-phosphate guanylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M1_GEMAT
Nucleotidyl transferase
13_1_40cm_scaffold_1276_21
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18978..19319)
DNA (342bp) protein (114aa)
chemotaxis protein CheY n=1 Tax=Caldimonas manganoxidans RepID=UPI0003606529
response regulator
Response regulator {ECO:0000313|EMBL:AHM05635.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elon
13_1_40cm_scaffold_1276_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19403..19756)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M3_GEMAT
hypothetical protein; K07131 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_1276_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19849..20415
DNA (567bp) protein (189aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_1276_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20420..21712
DNA (1293bp) protein (431aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SYS_GEMAT
Seryl-tRNA synthetase
13_1_40cm_scaffold_1276_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21795..22859
DNA (1065bp) protein (355aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M6_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-binding region ATPase domain protein
13_1_40cm_scaffold_1276_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22856..25114
DNA (2259bp) protein (753aa)
ATP-dependent DNA helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M7_GEMAT
13_1_40cm_scaffold_1276_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25111..25422
DNA (312bp) protein (104aa)
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLO
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
13_1_40cm_scaffold_1276_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26287..26724
DNA (438bp) protein (146aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Gem
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M9_GEMAT
Glutamyl-tRNA(Gln) amidotransferase subunit A
13_1_40cm_scaffold_1276_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

26721..28166
DNA (1446bp) protein (482aa)
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Gem
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N0_GEMAT
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
13_1_40cm_scaffold_1276_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(28163..29146)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N1_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phospholipase C/P1 nuclease
Displaying items 1-30 of 43 in total

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