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NECEvent2014_5_5_scaffold_55

Alias: 175_004_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_55_1
unknown

Not on your lists

comp(204..461)
DNA (258bp) protein (86aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_2
Megasphaera micronuciformis, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(696..1016)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZAR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ04599.1}; TaxID=706434 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera micronuciformis F
NECEvent2014_5_5_scaffold_55_3
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1003..1551)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RCY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23612.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
Phage-associated protein
NECEvent2014_5_5_scaffold_55_4
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2168..2689)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU79174.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-C
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_5_5_scaffold_55_5
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2706..3197)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D262_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78358.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-C
NECEvent2014_5_5_scaffold_55_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3282..6260)
DNA (2979bp) protein (993aa)
Putative Fels-1 prophage minor tail protein n=1 Tax=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) RepID=Q8ZQF5_SALTY
Side tail fiber protein homolog from lambdoid prophage {ECO:0000313|EMBL:CBJ00747.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
tail protein
NECEvent2014_5_5_scaffold_55_7
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6257..16108)
DNA (9852bp) protein (3284aa)
Uncharacterized protein n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LVF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD93880.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1
hypothetical protein
NECEvent2014_5_5_scaffold_55_8
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16118..18241)
DNA (2124bp) protein (708aa)
Putative methylase/helicase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0I9K5_9FIRM
Putative methylase/helicase {ECO:0000313|EMBL:EQB25615.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;
NECEvent2014_5_5_scaffold_55_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18245..18886)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB86783.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1774
hypothetical protein
NECEvent2014_5_5_scaffold_55_10
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18888..19355)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VR24_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ17398.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
NECEvent2014_5_5_scaffold_55_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19333..21582)
DNA (2250bp) protein (750aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMD4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFB86781.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1774
hypothetical protein
NECEvent2014_5_5_scaffold_55_12
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21582..22172)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF46835.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis
hypothetical protein
NECEvent2014_5_5_scaffold_55_13
unknown

Not on your lists

comp(22258..22416)
DNA (159bp) protein (53aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_14
unknown

Not on your lists

comp(22418..22783)
DNA (366bp) protein (122aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_15
Megasphaera genomosp. type_1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22796..23800)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LVG0_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFD93887.1}; TaxID=699218 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera genomosp. type_1
hypothetical protein
NECEvent2014_5_5_scaffold_55_16
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23816..24403)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Acidaminococcus intestini (strain RyC-MR95) RepID=G4Q3X7_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:KGF46839.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis
hypothetical protein
NECEvent2014_5_5_scaffold_55_17
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24405..24716)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X246_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD10346.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobac
hypothetical protein
NECEvent2014_5_5_scaffold_55_18
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24716..26431)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMC8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF46841.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis
hypothetical protein
NECEvent2014_5_5_scaffold_55_19
unknown

Not on your lists

comp(26435..26656)
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_20
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26669..27979)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=D4S866_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF46843.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis
hypothetical protein
NECEvent2014_5_5_scaffold_55_21
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27972..28358)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Streptococcus suis TL13 RepID=R4NNZ6_STRSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL48891.1}; TaxID=1276647 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis TL13.;"
NECEvent2014_5_5_scaffold_55_22
Dialister micraerophilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28460..28882)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Dialister microaerophilus UPII 345-E RepID=E4L8B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR43022.1}; TaxID=910314 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister microaerophilus UPII
NECEvent2014_5_5_scaffold_55_23
unknown

Not on your lists

comp(28893..29111)
DNA (219bp) protein (73aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_24
unknown

Not on your lists

comp(29092..29385)
DNA (294bp) protein (98aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_25

Not on your lists

comp(29416..29814)
DNA (399bp) protein (133aa)
UPI0003D66783 related cluster n=1 Tax=unknown RepID=UPI0003D66783
Uncharacterized protein {ECO:0000313|EMBL:KKN22083.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
NECEvent2014_5_5_scaffold_55_26
unknown

Not on your lists

comp(29837..30082)
DNA (246bp) protein (82aa)

This feature has no annotations

NECEvent2014_5_5_scaffold_55_27
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30075..30410)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI0003820EBE
Uncharacterized protein {ECO:0000313|EMBL:CCX53793.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veill
hypothetical protein
NECEvent2014_5_5_scaffold_55_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30407..30850)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S482_FINM2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG09073.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 2932
NECEvent2014_5_5_scaffold_55_29
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31097..33157)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MWH1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDF04910.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megas
primase 2
NECEvent2014_5_5_scaffold_55_30
Lactobacillus saerimneri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33154..34737)
DNA (1584bp) protein (528aa)
DNA/RNA helicase n=1 Tax=Lactobacillus saerimneri 30a RepID=M5J773_9LACO rbh
DNA/RNA helicase {ECO:0000313|EMBL:EKW99402.1}; TaxID=1227363 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus saerimneri 30a.;"
DEAD/DEAH box helicase
Displaying items 1-30 of 32 in total

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