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NECEvent2014_3_2_scaffold_72

Alias: 173_006_scaffold_72

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_72_1
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1012
DNA (1011bp) protein (337aa)
Peptidoglycan-binding LysM n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI50_ALKOO
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ABW19482.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
NECEvent2014_3_2_scaffold_72_2
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1106..2758)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N289_CLOK5 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH07912.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1
hypothetical protein
NECEvent2014_3_2_scaffold_72_3
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3095..3994)
DNA (900bp) protein (300aa)
Phage-related protein n=2 Tax=Clostridium kluyveri RepID=A5N291_CLOK5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07913.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1
NECEvent2014_3_2_scaffold_72_4
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4268..6571)
DNA (2304bp) protein (768aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X8Q9_ANEAE rbh
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:ERI11335.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacill
hypothetical protein
NECEvent2014_3_2_scaffold_72_5
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7219..7440
DNA (222bp) protein (74aa)
Helix-turn-helix domain protein n=2 Tax=Firmicutes RepID=F6B3A4_DESCC
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEF95135.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carbo
NECEvent2014_3_2_scaffold_72_6
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7445..9016
DNA (1572bp) protein (524aa)
Type I restriction-modification system, M subunit n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B3A5_DESCC rbh
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:AEF95136.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desu
type I restriction-modification system, M subunit
NECEvent2014_3_2_scaffold_72_7
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9009..10025
DNA (1017bp) protein (339aa)
Virulence protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R533_9FIRM rbh
Virulence protein {ECO:0000313|EMBL:CDF44996.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:
Virulence protein
NECEvent2014_3_2_scaffold_72_8
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10018..11202
DNA (1185bp) protein (395aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B3A6_DESCC rbh
restriction modification system DNA specificity domain-containing protein
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:AEF95137.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;"
NECEvent2014_3_2_scaffold_72_9
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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11199..14300
DNA (3102bp) protein (1034aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ACZ19764.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ACZ19764.1};; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B6X3_THEAS rbh
HsdR family type I site-specific deoxyribonuclease
NECEvent2014_3_2_scaffold_72_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14323..14955
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19660.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
NECEvent2014_3_2_scaffold_72_11
unknown

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14933..15124
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 11 items

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