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NECEvent2014_6_7_scaffold_260

Alias: 176_007_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_260_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110..982
DNA (873bp) protein (291aa)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Clostridium colicanis 209318 RepID=N9WCN4_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83529.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_7_scaffold_260_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(946..1995)
DNA (1050bp) protein (350aa)
Integrase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FPT6_CLOPA rbh
Integrase {ECO:0000313|EMBL:ETD65748.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
phage integrase family site-specific recombinase
NECEvent2014_6_7_scaffold_260_3
unknown

Not on your lists

comp(2020..2274)
DNA (255bp) protein (85aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2313..2741)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TMD2_CLOBB
hypothetical protein
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CDH89843.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD24520.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
NECEvent2014_6_7_scaffold_260_5
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2768..3205)
DNA (438bp) protein (146aa)
Transcriptional regulator n=3 Tax=Clostridium acetobutylicum RepID=F0K6F0_CLOAE
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:AAK78528.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutyli
NECEvent2014_6_7_scaffold_260_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3413..3649
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5MYS9_CLOK5
Uncharacterized protein {ECO:0000313|EMBL:KIL06946.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
NECEvent2014_6_7_scaffold_260_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3642..4013
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZ99_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EES51330.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_6_7_scaffold_260_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4028..4849
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PYW2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY81959.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
NECEvent2014_6_7_scaffold_260_9

Not on your lists

4862..5164
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCK9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21937.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_6_7_scaffold_260_10
unknown

Not on your lists

5174..5464
DNA (291bp) protein (97aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_11
unknown

Not on your lists

5540..5761
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5777..6334
DNA (558bp) protein (186aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUL8_CLOPF
RNA polymerase sigma-B factor {ECO:0000313|EMBL:EDT14103.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
sigma-70 family RNA polymerase sigma factor
NECEvent2014_6_7_scaffold_260_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6331..6501
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FN27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB14658.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
NECEvent2014_6_7_scaffold_260_14
unknown

Not on your lists

6575..6814
DNA (240bp) protein (80aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6827..7501
DNA (675bp) protein (225aa)
Phage essential recombination function protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZ93_CLOBU
ERF superfamily protein
ERF superfamily protein {ECO:0000313|EMBL:AIY84910.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_7_scaffold_260_16
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7516..8445
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW77_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ88690.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_6_7_scaffold_260_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8462..9187
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TM16_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AJG98836.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium
hypothetical protein
NECEvent2014_6_7_scaffold_260_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9180..9572
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCJ4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87945.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_6_7_scaffold_260_19
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

9569..10045
DNA (477bp) protein (159aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII58082.1}; TaxID=1432059 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides
NECEvent2014_6_7_scaffold_260_20
unknown

Not on your lists

10042..10185
DNA (144bp) protein (48aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10186..10530
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287D844
Uncharacterized protein {ECO:0000313|EMBL:EES51258.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_6_7_scaffold_260_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10543..10779
DNA (237bp) protein (79aa)
Conserved domain protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BW18_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT14097.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
NECEvent2014_6_7_scaffold_260_23
unknown

Not on your lists

10867..11127
DNA (261bp) protein (87aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_24
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

11124..11450
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A7F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39145.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
NECEvent2014_6_7_scaffold_260_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11440..11742
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BBK2_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EDS77071.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund
NECEvent2014_6_7_scaffold_260_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11735..12154
DNA (420bp) protein (140aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium colicanis 209318 RepID=N9W8V4_9CLOT
ssb; single-stranded DNA-binding family protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1415775 species="Bacteria; Firmicutes; Clostri
NECEvent2014_6_7_scaffold_260_27
unknown

Not on your lists

12156..12329
DNA (174bp) protein (58aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_28
unknown

Not on your lists

12335..12697
DNA (363bp) protein (121aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_260_29
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12852..13208
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55068.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
NECEvent2014_6_7_scaffold_260_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13287..13526
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000375B056
Uncharacterized protein {ECO:0000313|EMBL:KJZ96943.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Displaying items 1-30 of 64 in total

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