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rifoxyb1_full_scaffold_964

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_964_1
GWC2_OD1_49_12, Kaiserbacteria, Parcubacteria, Bacteria

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1..135
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW06748.1}; TaxID=1618675 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWC2_49_12.;"
rifoxyb1_full_scaffold_964_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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167..808
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364237D
LmbE family protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_964_3
unknown

Not on your lists

805..1914
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST id=5103806 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST Tax=AR20
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_964_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

1976..3595
DNA (1620bp) protein (540aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RBG_13_Woesearchaeota_36_6_curated
pyrG; CTP synthetase (EC:6.3.4.2)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDF8_9DELT
rifoxyb1_full_scaffold_964_5
unknown

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comp(3584..4024)
DNA (441bp) protein (147aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_6
unknown

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comp(4058..4927)
DNA (870bp) protein (290aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_7
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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comp(4961..5863)
DNA (903bp) protein (301aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWF2_Lentisphaerae_52_8_curated
NAD-dependent epimerase/dehydratase id=4396259 bin=GWF2_Lentisphaerae_52_8 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase
rifoxyb1_full_scaffold_964_8
unknown

Not on your lists

comp(5960..6238)
DNA (279bp) protein (93aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_9
unknown

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comp(6300..7163)
DNA (864bp) protein (288aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_10
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7280..8380
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TG64_CALOO
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL43184.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosi
rifoxyb1_full_scaffold_964_11
unknown

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8534..9136
DNA (603bp) protein (201aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_12
unknown

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9176..10687
DNA (1512bp) protein (504aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10747..11559)
DNA (813bp) protein (271aa)
DNA polymerase beta domain protein region (Fragment) Tax=AR17
DNA polymerase beta domain protein region (Fragment) id=4315674 bin=GWC2_Elusimicrobia_51_8 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA polymerase beta protein
DNA polymerase beta protein
rifoxyb1_full_scaffold_964_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11572..13518)
DNA (1947bp) protein (649aa)
hypothetical protein Tax=AR17
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifoxyb1_full_scaffold_964_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(13520..14851)
DNA (1332bp) protein (444aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_03
seg id=5800821 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifoxyb1_full_scaffold_964_16

Not on your lists

15025..15414
DNA (390bp) protein (130aa)
lipoprotein signal peptidase (EC:3.4.23.36)
lipoprotein signal peptidase (EC:3.4.23.36)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI0003678F4B
Marine sediment metagenome DNA, contig: S01H1_S04036 {ECO:0000313|EMBL:GAF85946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifoxyb1_full_scaffold_964_17
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15477..15740
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWM9_METMJ
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN57779.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
rifoxyb1_full_scaffold_964_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15715..16152
DNA (438bp) protein (146aa)
PilT protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0N1V8_9EURY
PilT protein domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
rifoxyb1_full_scaffold_964_19
unknown

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comp(16140..16406)
DNA (267bp) protein (89aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_20
unknown

Not on your lists

comp(16568..17245)
DNA (678bp) protein (226aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_21

Not on your lists


17515..18786
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003799DAC
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
signal recognition particle SRP54 protein
signal recognition particle SRP54 protein
rifoxyb1_full_scaffold_964_22
unknown

Not on your lists

comp(18783..19349)
DNA (567bp) protein (189aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

19418..20020
DNA (603bp) protein (201aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BC5F7
O-sialoglycoprotein endopeptidase
O-sialoglycoprotein endopeptidase
rifoxyb1_full_scaffold_964_24

Not on your lists

comp(20009..20470)
DNA (462bp) protein (154aa)
hypothetical protein; K07038 inner membrane protein id=5049593 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53769.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Membrane-bound metal-dependent hydrolase
Membrane-bound metal-dependent hydrolase
rifoxyb1_full_scaffold_964_25
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20544..21122
DNA (579bp) protein (193aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
cell division protein FtsJ
cell division protein FtsJ
Ribosomal RNA large subunit methyltransferase E id=3731189 bin=GWB1_CP_36_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
rifoxyb1_full_scaffold_964_26

Not on your lists

comp(21112..22095)
DNA (984bp) protein (328aa)
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Met-10+ protein {ECO:0000313|EMBL:AJF61442.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Met-10 like-protein SAM-dependent methyltransferase
Met-10 like-protein SAM-dependent methyltransferase
rifoxyb1_full_scaffold_964_27
unknown

Not on your lists

22167..22904
DNA (738bp) protein (246aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_28
unknown

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comp(22905..23915)
DNA (1011bp) protein (337aa)
Flap endonuclease 1 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGN5_PYRYC id=5103204 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Flap endonuclease 1 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGN5_PYRYC Tax=AR20
Flap endonuclease 1
Flap endonuclease 1
rifoxyb1_full_scaffold_964_29
unknown

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comp(23967..24524)
DNA (558bp) protein (186aa)

This feature has no annotations

rifoxyb1_full_scaffold_964_30
unknown

Not on your lists

comp(24521..24997)
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

View Taxonomy