ggKbase home page

RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_34_150

RIFCSPHIGHO2_01_FULL_AR17_34_151
In projects: RIFCSPHIGHO2_01_FULL  |  archaea-rifleo2  |  rifle_organic_carbon  |  cpr-dpann-all  |  archaea_ggkbase

Consensus taxonomy: AR17  →  Woesearchaeaota  →  DPANN  →  Archaea

Taxonomy override: Woesearchaeota

Displaying items 1-50 of 72 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifcsphigho2_01_scaffold_38471 11 9535 bp 35.46 117.90 68.24
rifcsphigho2_01_scaffold_81026 9 6748 bp 33.49 155.41 79.18
rifcsphigho2_01_scaffold_28830
Species: AR17 (87.5%)
16 12520 bp 34.56 156.96 80.80
rifcsphigho2_01_scaffold_123912
Species: AR17 (100%)
16 7562 bp 35.96 162.20 81.37
rifcsphigho2_01_scaffold_54366
Species: AR17 (64.29%)
14 10788 bp 33.55 110.23 81.65
rifcsphigho2_01_scaffold_48953 8 5353 bp 32.58 140.87 83.50
rifcsphigho2_01_scaffold_86136
Species: AR17 (50%)
10 8714 bp 34.75 135.06 84.21
rifcsphigho2_01_scaffold_26616
Species: AR17 (86.67%)
14 7938 bp 33.96 146.97 84.39
rifcsphigho2_01_scaffold_26471
Species: AR17 (82.61%)
23 16081 bp 34.05 162.00 84.88
rifcsphigho2_01_scaffold_55707 13 10637 bp 33.56 158.50 84.89
rifcsphigho2_01_scaffold_51776
Species: AR17 (87.5%)
8 5157 bp 32.56 133.70 86.21
rifcsphigho2_01_scaffold_80997
Species: AR17 (100%)
8 5710 bp 33.06 161.68 87.22
rifcsphigho2_01_scaffold_51319
Species: AR17 (92.31%)
13 10175 bp 33.55 160.65 87.54
rifcsphigho2_01_scaffold_88101 10 7347 bp 35.61 161.03 87.59
rifcsphigho2_01_scaffold_42015 19 15903 bp 34.76 161.06 87.85
rifcsphigho2_01_scaffold_53824
Species: AR17 (93.75%)
16 10780 bp 34.58 155.55 87.89
rifcsphigho2_01_scaffold_47337
Species: AR17 (100%)
9 7753 bp 34.43 158.62 88.73
rifcsphigho2_01_scaffold_59166
Species: AR17 (88.89%)
9 6463 bp 31.47 157.12 88.84
rifcsphigho2_01_scaffold_14858
Species: AR17 (95.24%)
21 20881 bp 33.12 158.66 89.21
rifcsphigho2_01_scaffold_7708 20 19000 bp 33.09 100.64 90.28
rifcsphigho2_01_scaffold_44874 20 13022 bp 34.60 161.39 90.31
rifcsphigho2_01_scaffold_39684
Species: AR17 (69.23%)
12 9820 bp 33.14 156.57 90.55
rifcsphigho2_01_scaffold_54479 9 7776 bp 34.52 157.45 90.63
rifcsphigho2_01_scaffold_58068
Species: AR17 (80.65%)
31 24032 bp 34.80 159.26 90.68
rifcsphigho2_01_scaffold_52732
Species: AR17 (90%)
10 5633 bp 34.24 148.75 90.75
rifcsphigho2_01_scaffold_55219 17 11104 bp 35.37 158.32 90.91
rifcsphigho2_01_scaffold_38702
Species: AR17 (100%)
7 6238 bp 33.23 155.65 91.04
rifcsphigho2_01_scaffold_50068 11 8427 bp 35.80 148.81 91.10
rifcsphigho2_01_scaffold_8833 21 19908 bp 34.85 155.60 91.21
rifcsphigho2_01_scaffold_81143 14 6101 bp 34.09 155.83 91.36
rifcsphigho2_01_scaffold_21016
Species: AR17 (89.66%)
28 19491 bp 33.72 155.42 91.57
rifcsphigho2_01_scaffold_48315
Domain: Archaea (62.5%)
16 8119 bp 34.33 154.48 91.67
rifcsphigho2_01_scaffold_21107
Species: AR17 (87.23%)
45 30717 bp 34.80 159.24 91.68
rifcsphigho2_01_scaffold_3842
Species: AR17 (89.66%)
29 24405 bp 33.45 151.07 91.74
rifcsphigho2_01_scaffold_58328
Species: AR17 (100%)
4 5154 bp 33.55 141.77 92.03
rifcsphigho2_01_scaffold_52779
Species: AR17 (77.78%)
9 5370 bp 32.79 156.17 92.07
rifcsphigho2_01_scaffold_42780
Species: AR17 (100%)
13 9884 bp 35.23 157.10 92.12
rifcsphigho2_01_scaffold_64082
Domain: Archaea (50%)
10 7953 bp 33.26 157.82 92.15
rifcsphigho2_01_scaffold_15074
Species: AR17 (70.27%)
36 29641 bp 33.70 132.25 92.16
rifcsphigho2_01_scaffold_22471 8 8824 bp 33.49 160.26 92.34
rifcsphigho2_01_scaffold_35808
Domain: Archaea (57.14%)
7 6558 bp 33.81 153.30 92.36
rifcsphigho2_01_scaffold_79788 13 8159 bp 33.25 158.20 92.36
rifcsphigho2_01_scaffold_27513
Species: AR17 (83.33%)
16 17020 bp 35.76 153.56 92.68
rifcsphigho2_01_scaffold_11317
Species: AR17 (85.71%)
26 19401 bp 34.10 156.52 92.84
rifcsphigho2_01_scaffold_26887 19 13567 bp 31.47 94.57 92.94
rifcsphigho2_01_scaffold_15843
Species: AR17 (90.32%)
29 22366 bp 33.41 156.95 93.25
rifcsphigho2_01_scaffold_19166
Species: AR17 (88.89%)
18 13338 bp 34.31 158.78 93.39
rifcsphigho2_01_scaffold_106235 7 5611 bp 33.63 160.85 93.41
rifcsphigho2_01_scaffold_74819
Class: Woesearchaeaota (50%)
18 8128 bp 31.94 93.43 93.45
rifcsphigho2_01_scaffold_52911 20 13269 bp 32.23 107.45 93.58
Displaying items 1-50 of 72 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.