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rifcsphigho2_01_scaffold_7898

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_7898_1
unknown

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_2
unknown

Not on your lists

comp(466..954)
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_3
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1153..1992)
DNA (840bp) protein (280aa)
ISmav2-like transposase n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1Q9I5_9ACTO
ISmav2-like transposase {ECO:0000313|EMBL:EHN78902.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;
integrase catalytic subunit
rifcsphigho2_01_scaffold_7898_4
unknown

Not on your lists

comp(2130..2396)
DNA (267bp) protein (89aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_5
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2908..3666
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein (EC:3.6.3.-); K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ATP-binding component n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PID8_9BACT
rifcsphigho2_01_scaffold_7898_6
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3647..4438
DNA (792bp) protein (264aa)
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
Putative ABC-2 type transport system, ATP-binding and permease component id=4782021 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
putative ABC transporter ATP-binding and permease
rifcsphigho2_01_scaffold_7898_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4479..5384
DNA (906bp) protein (302aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RBG_13_Pacearchaeota_36_9_curated
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5045761 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein-export membrane protein SecF
rifcsphigho2_01_scaffold_7898_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5377..6888
DNA (1512bp) protein (504aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY id=5102895 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
secd/secf/secdf export membrane protein; K03072 preprotein translocase subunit SecD Tax=RBG_13_Pacearchaeota_36_9_curated
SecD/SecF/SecDF export membrane protein
rifcsphigho2_01_scaffold_7898_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

6888..7319
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BE02E
hypothetical protein Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_7898_10
unknown

Not on your lists

7316..7522
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_11

Not on your lists

7691..8470
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C6L7_9BACT
Marine sediment metagenome DNA, contig: S01H1_L01575 {ECO:0000313|EMBL:GAF82251.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
glycosyl transferase family protein
rifcsphigho2_01_scaffold_7898_12
unknown

Not on your lists

8514..10319
DNA (1806bp) protein (602aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=cyanobacterium UCYN-A RepID=D3EQM4_UCYNA id=5103424 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=cyanobacterium UCYN-A RepID=D3EQM4_UCYNA Tax=AR20
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
rifcsphigho2_01_scaffold_7898_13
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

10364..11905
DNA (1542bp) protein (514aa)
cytidyltransferase Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Cytidyltransferase-related domain protein id=3137412 bin=GWC2_Elusimicrobia_64_44 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
cytidyltransferase
rifcsphigho2_01_scaffold_7898_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

11958..12938
DNA (981bp) protein (327aa)
dTDP-glucose-4,6 dehydratase (EC:4.2.1.46) Tax=AR19
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WBA8_MAGSA
nucleoside-diphosphate-sugar epimerase
rifcsphigho2_01_scaffold_7898_15
GWA2_OD1_43_9, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

13005..14552
DNA (1548bp) protein (516aa)
Polysaccharide biosynthesis protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RH15_ARCPA
Polysaccharide biosynthesis protein Tax=GWA2_OD1_43_9
polysaccharide biosynthesis protein
rifcsphigho2_01_scaffold_7898_16
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14565..15998)
DNA (1434bp) protein (478aa)
Radical SAM domain protein
UPI0001BC594B related cluster Tax=AR19
Radical SAM domain protein id=2171111 bin=GWB2_Nitrospirae_rel_47_37 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rifcsphigho2_01_scaffold_7898_17

Not on your lists

16097..16474
DNA (378bp) protein (126aa)
Pyridoxal-phosphate-dependent aminotransferase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CY93_9BURK
Aminotransferase {ECO:0000313|EMBL:KHO55457.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifcsphigho2_01_scaffold_7898_18

Not on your lists

16455..17111
DNA (657bp) protein (219aa)
Pyridoxal-phosphate-dependent aminotransferase n=1 Tax=uncultured bacterium RepID=K2B9Q3_9BACT
Aminotransferase {ECO:0000313|EMBL:KHO55457.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
pyridoxal-phosphate-dependent aminotransferase
rifcsphigho2_01_scaffold_7898_19

Not on your lists

17111..17485
DNA (375bp) protein (125aa)
Aminotransferase {ECO:0000313|EMBL:KHO55458.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
aminotransferase id=5095320 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
WecE; cell wall biogenesis regulatory protein
rifcsphigho2_01_scaffold_7898_20
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17590..18126
DNA (537bp) protein (179aa)
pyridoxal-phosphate-dependent aminotransferase (EC:4.2.1.- 2.6.1.-)
hypothetical protein n=1 Tax=candidate division WS3 bacterium JGI 0000059-A10 RepID=UPI0003634FF7
Uncharacterized protein {ECO:0000313|EMBL:KKQ76889.1}; Flags: Fragment;; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
rifcsphigho2_01_scaffold_7898_21
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(18300..19697)
DNA (1398bp) protein (466aa)
Radical SAM superfamily enzyme n=1 Tax=Herbaspirillum sp. CF444 RepID=J2KMU1_9BURK
radical SAM domain-containing protein Tax=AR19
radical SAM domain-containing protein
rifcsphigho2_01_scaffold_7898_22
unknown

Not on your lists

19766..20179
DNA (414bp) protein (138aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_23
R_OD1_Yanofskybacteria_47_9b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(20240..20746)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Streptococcus mitis bv. 2 str. SK95 RepID=F9LUW4_STRMT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_47_9b_curated
hypothetical protein
rifcsphigho2_01_scaffold_7898_24
unknown

Not on your lists

comp(20984..21637)
DNA (654bp) protein (218aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_25
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(21787..22509)
DNA (723bp) protein (241aa)
Putative uncharacterized protein id=4845819 bin=PER_GWC2_41_7 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein Tax=AR13
hypothetical protein
rifcsphigho2_01_scaffold_7898_26
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22683..23102)
DNA (420bp) protein (140aa)
NUDIX hydrolase id=4959661 bin=GWC2_Bacteroidetes_40_22 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
NUDIX hydrolase Tax=GWA2_Bacteroidetes_40_15_curated
NUDIX hydrolase
rifcsphigho2_01_scaffold_7898_27
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(23099..24895)
DNA (1797bp) protein (599aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Acetolactate synthase large subunit id=3605247 bin=GWC2_Elusimicrobia_51_8 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
acetolactate synthase large subunit
rifcsphigho2_01_scaffold_7898_28
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25020..26216)
DNA (1197bp) protein (399aa)
class I/II aminotransferase (EC:2.6.1.1) Tax=GWA2_Deltaproteobacteria_54_12_curated
class I/II aminotransferase (EC:2.6.1.1)
Aminotransferase, class I and II id=2253544 bin=GWB2_Proteobacteria_55_19 species=Candidatus Puniceispirillum marinum genus=Candidatus Puniceispirillum taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
rifcsphigho2_01_scaffold_7898_29
unknown

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comp(26213..27472)
DNA (1260bp) protein (420aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7898_30

Not on your lists

comp(27474..28493)
DNA (1020bp) protein (340aa)
Polysaccharide biosynthesis protein capd n=1 Tax=Thermosipho africanus H17ap60334 PF94_9THEM">RepID=K2PF94_9THEM
Uncharacterized protein {ECO:0000313|EMBL:KKL24181.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
UDP-glucose 4-epimerase
Displaying items 1-30 of 33 in total

View Taxonomy