ggKbase home page

rifcsphigho2_01_scaffold_2325

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_2325_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2..409
DNA (408bp) protein (136aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(406..1074)
DNA (669bp) protein (223aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1150..2274)
DNA (1125bp) protein (375aa)
Small GTP-binding protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBT6_METIK
GTP-binding protein; K06944 Tax=RBG_13_Woesearchaeota_36_6_curated
small GTP-binding protein
rifcsphigho2_01_scaffold_2325_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2308..2880
DNA (573bp) protein (191aa)
Putative uncharacterized protein Tax=AR11
Putative uncharacterized protein id=5050194 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_2325_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2898..3797)
DNA (900bp) protein (300aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=AR11
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003753E03
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifcsphigho2_01_scaffold_2325_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3922..4122
DNA (201bp) protein (67aa)
hypothetical protein
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_01_scaffold_2325_7
unknown

Not on your lists

comp(4162..4662)
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2325_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4750..6228
DNA (1479bp) protein (493aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

6264..7607
DNA (1344bp) protein (448aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7619..8077)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370E291
hypothetical protein Tax=AR11
hypothetical protein
rifcsphigho2_01_scaffold_2325_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8215..10023)
DNA (1809bp) protein (603aa)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=AR11
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B id=5043737 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
InfB_2; translation initiation factor IF-2
rifcsphigho2_01_scaffold_2325_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10224..10577)
DNA (354bp) protein (118aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

10730..11779
DNA (1050bp) protein (350aa)
N(2),N(2)-dimethylguanosine tRNA methyltransferase; K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=AR11
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
N(2),N(2)-dimethylguanosine tRNA methyltransferase
rifcsphigho2_01_scaffold_2325_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11846..12094)
DNA (249bp) protein (83aa)
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=AR11
Elongation factor 1-beta id=5799999 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 1-beta
rifcsphigho2_01_scaffold_2325_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12126..12296)
DNA (171bp) protein (57aa)
Putative uncharacterized protein id=5799998 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_01_scaffold_2325_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12442..13512)
DNA (1071bp) protein (357aa)
RNA 3'-terminal-phosphate cyclase; K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] Tax=AR11
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA 3'-terminal-phosphate cyclase
rifcsphigho2_01_scaffold_2325_17
Parcubacteria bacterium GW2011_GWF1_40_5, Parcubacteria, Bacteria

Not on your lists

13565..13993
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1320 RepID=R6DW94_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR65098.1}; TaxID=1618955 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_5.;"
hypothetical protein
rifcsphigho2_01_scaffold_2325_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14010..14573
DNA (564bp) protein (188aa)
seg id=5799965 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_01_scaffold_2325_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14629..15339)
DNA (711bp) protein (237aa)
cytochrome c biogenesis protein, transmembrane region Tax=AR11
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
rifcsphigho2_01_scaffold_2325_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15342..15764)
DNA (423bp) protein (141aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15766..16059)
DNA (294bp) protein (98aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16059..16466)
DNA (408bp) protein (136aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

16587..17378
DNA (792bp) protein (264aa)
id=5042250 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_01_scaffold_2325_24
R_OP11_Woesebacteria_44_24b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17375..17908)
DNA (534bp) protein (178aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_24b_curated
rifcsphigho2_01_scaffold_2325_25

Not on your lists

comp(17971..18375)
DNA (405bp) protein (135aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEF8_PYRF1
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
rifcsphigho2_01_scaffold_2325_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18372..18842)
DNA (471bp) protein (157aa)
riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=AR11
riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYD9_METKA
rifcsphigho2_01_scaffold_2325_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18999..19355)
DNA (357bp) protein (119aa)
riboflavin kinase; K07732 riboflavin kinase, archaea type [EC:2.7.1.161] Tax=AR11
Riboflavin kinase n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QU94_VULM7
riboflavin kinase
rifcsphigho2_01_scaffold_2325_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19498..19917)
DNA (420bp) protein (140aa)
hypothetical protein
Uncharacterized protein Tax=AR11
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_2325_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19914..20531)
DNA (618bp) protein (206aa)
Tax=AR11
rifcsphigho2_01_scaffold_2325_30
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

20602..21207
DNA (606bp) protein (202aa)
hypothetical protein
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
Displaying items 1-30 of 42 in total

View Taxonomy