ggKbase home page

rifcsphigho2_01_scaffold_12745

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_12745_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
phosphonate-transporting ATPase; K02003 putative ABC transport system ATP-binding protein id=5045281 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ABC transporter ATP-binding protein
rifcsphigho2_01_scaffold_12745_2
unknown

Not on your lists

469..615
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12745_3
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

791..1252
DNA (462bp) protein (154aa)
dTMP kinase (EC:2.7.4.9)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=5241644 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Probable thymidylate kinase Tax=GWA2_OD1_31_28_partial
rifcsphigho2_01_scaffold_12745_4
unknown

Not on your lists

comp(1253..1675)
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12745_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1871..2302)
DNA (432bp) protein (144aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=CG_Woesearch_02
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=1725381 bin=GWB2_Elusimicrobia_63_16 species=Nocardioidaceae bacterium Broad-1 genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
rifcsphigho2_01_scaffold_12745_6
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(2395..2895)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP27104.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_12745_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(2973..3575)
DNA (603bp) protein (201aa)
phosphoesterase (EC:3.1.-.-); K01175 [EC:3.1.-.-] Tax=RBG_13_Woesearchaeota_36_6_curated
Ser/Thr protein phosphatase family protein id=5799785 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsphigho2_01_scaffold_12745_8
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3618..4802)
DNA (1185bp) protein (395aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain id=5049183 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld
rifcsphigho2_01_scaffold_12745_9

Not on your lists

comp(4789..5727)
DNA (939bp) protein (313aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=5049182 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Mg-chelatase subunit ChlI/Chld, magnesium chelatase subunit I {ECO:0000313|EMBL:KHO45173.1}; EC=6.6.1.1 {ECO:0000313|EMBL:KHO45173.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_12745_10

Not on your lists

comp(5808..6710)
DNA (903bp) protein (301aa)
Nitrite reductase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZD3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKS26088.1}; TaxID=1618819 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_11.;"
putative Fe-S oxidoreductase
rifcsphigho2_01_scaffold_12745_11
unknown

Not on your lists

7054..7545
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12745_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7620..9866
DNA (2247bp) protein (749aa)
Hef nuclease; K10896 fanconi anemia group M protein Tax=CG_Woesearch_02
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DEAD/DEAH box helicase
rifcsphigho2_01_scaffold_12745_13
ACD78, Gracilibacteria, Bacteria

Not on your lists

9923..11143
DNA (1221bp) protein (407aa)
ArsA_ATPase Tax=ACD78
ArsA_ATPase id=124429 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rifcsphigho2_01_scaffold_12745_14
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11146..11985)
DNA (840bp) protein (280aa)
peptidase M48, Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Protease HtpX homolog id=4109493 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Heat shock protein, Metallo peptidase, MEROPS family M48B
rifcsphigho2_01_scaffold_12745_15
unknown

Not on your lists

comp(12036..12449)
DNA (414bp) protein (138aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12745_16

Not on your lists

comp(12475..12870)
DNA (396bp) protein (132aa)
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TOPRIM protein {ECO:0000313|EMBL:KHO44982.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Toprim protein
Displaying 16 items

View Taxonomy