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rifcsphigho2_01_scaffold_5054

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5054_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3..569)
DNA (567bp) protein (189aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
rifcsphigho2_01_scaffold_5054_2
AR11, Woesearchaeaota, DPANN, Archaea

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703..2028
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
Predicted hydrolase Tax=AR11
RNA-metabolising metallo-beta-lactamase
rifcsphigho2_01_scaffold_5054_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2072..2353
DNA (282bp) protein (94aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_5054_4
AR11, Woesearchaeaota, DPANN, Archaea

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2662..3891
DNA (1230bp) protein (410aa)
Polysaccharide deacetylase Tax=AR11
bi-functional transferase/deacetylase
Glycosyl transferase, group 2 family protein/polysaccharide deacetylase family protein id=3400125 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_5054_5
AR11, Woesearchaeaota, DPANN, Archaea

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3893..5239
DNA (1347bp) protein (449aa)
Glucomannan 4-beta-mannosyltransferase (EC:2.4.1.32)
Glucomannan 4-beta-mannosyltransferase Tax=AR11
glycosyltransferase id=18248834 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_01_scaffold_5054_6
AR11, Woesearchaeaota, DPANN, Archaea

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5318..6664
DNA (1347bp) protein (449aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase Tax=AR11
id=5050185 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_5054_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6665..7129)
DNA (465bp) protein (155aa)
Transcriptional regulator, XRE family Tax=AR11
transcription factor; K03627 putative transcription factor id=5041886 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_5054_8
AR11, Woesearchaeaota, DPANN, Archaea

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7264..8643
DNA (1380bp) protein (460aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_5054_9
AR11, Woesearchaeaota, DPANN, Archaea

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8716..9489
DNA (774bp) protein (258aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_5054_10
AR11, Woesearchaeaota, DPANN, Archaea

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9482..13159
DNA (3678bp) protein (1226aa)
Membrane-bound metallopeptidase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LAF1_9CYAN
hypothetical protein Tax=AR11
peptidase M23
rifcsphigho2_01_scaffold_5054_11
AR11, Woesearchaeaota, DPANN, Archaea

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13203..13649
DNA (447bp) protein (149aa)
hypothetical protein; K14535 transcription initiation factor TFIID subunit 9 / adenylate kinase [EC:2.7.4.3] Tax=AR11
Adenylate kinase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AKF5_METOI id=5102891 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Adenylate kinase
rifcsphigho2_01_scaffold_5054_12

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13708..14862
DNA (1155bp) protein (385aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KHO50267.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KHO50267.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
class I and II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] id=24608227 bin=RAAC11 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
aspartate aminotransferase (EC:2.6.1.1)
rifcsphigho2_01_scaffold_5054_13
AR11, Woesearchaeaota, DPANN, Archaea

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15022..16494
DNA (1473bp) protein (491aa)
phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] Tax=AR11
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] id=5047673 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ppcA; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
rifcsphigho2_01_scaffold_5054_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

16526..17650
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIV2_PYRYC
hypothetical protein Tax=AR11
hypothetical protein
rifcsphigho2_01_scaffold_5054_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17977..18399)
DNA (423bp) protein (141aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Pseudogulbenkiania RepID=G2IYY2_PSEUL
glyoxalase/bleomycin resistance protein/dioxygenase; K07032 Tax=AR11
glyoxalase/bleomycin resistance protein/dioxygenase
rifcsphigho2_01_scaffold_5054_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18389..19195)
DNA (807bp) protein (269aa)
nucleoside-diphosphate-sugar pyrophosphorylase (EC:2.7.7.-)
glyoxalase/bleomycin resistance protein/dioxygenase; K07032 Tax=AR11
Nucleotidyl transferase id=5800118 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_5054_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19289..20587
DNA (1299bp) protein (433aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=AR11
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Similar to UDP-glucose 6-dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q302_9BACT
rifcsphigho2_01_scaffold_5054_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

20584..21345
DNA (762bp) protein (254aa)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=AR11
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZW7_METI4
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
rifcsphigho2_01_scaffold_5054_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

21352..22287
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=AR11
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase family protein
rifcsphigho2_01_scaffold_5054_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22296..23441)
DNA (1146bp) protein (382aa)
Tax=AR11
rifcsphigho2_01_scaffold_5054_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23414..24691)
DNA (1278bp) protein (426aa)
hypothetical protein Tax=AR11
hypothetical protein
hypothetical protein id=2296203 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
rifcsphigho2_01_scaffold_5054_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24675..26117)
DNA (1443bp) protein (481aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R9B7_METFO
lipopolysaccharide O-side chain biosynthesis protein Tax=AR11
lipopolysaccharide O-side chain biosynthesis protein
rifcsphigho2_01_scaffold_5054_23
AR11, Woesearchaeaota, DPANN, Archaea

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comp(26167..26931)
DNA (765bp) protein (255aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (EC:5.4.99.18); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=AR11
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5240827 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_5054_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(26965..28101)
DNA (1137bp) protein (379aa)
Glycosyltransferase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z0J3_9GAMM
group 1 glycosyl transferase Tax=AR11
group 1 glycosyl transferase
rifcsphigho2_01_scaffold_5054_25

Not on your lists

comp(28162..29697)
DNA (1536bp) protein (512aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50279.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Radical SAM domain protein id=2582827 bin=GWC2_Elusimicrobia_64_44 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
rifcsphigho2_01_scaffold_5054_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

29826..30812
DNA (987bp) protein (329aa)
AsnC family transcriptional regulator Tax=AR11
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_5054_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


30882..33332
DNA (2451bp) protein (817aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=AR11
DNA gyrase subunit A n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX58_METHD
DNA gyrase, A subunit
Displaying 27 items

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