ggKbase home page

rifcsphigho2_01_scaffold_5717

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5717_1
R_OP11_Levybacteria_42_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

1..975
DNA (975bp) protein (325aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_42_15_curated
GHMP kinase id=3639074 bin=GWA1_Kazan_50_15 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation rbh
GHMP kinase
rifcsphigho2_01_scaffold_5717_2
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

976..1578
DNA (603bp) protein (201aa)
hypothetical protein; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_RIF03_38_11_curated
GHMP kinase id=3639077 bin=GWA1_Kazan_50_15 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation rbh
sugar isomerase (SIS)
rifcsphigho2_01_scaffold_5717_3
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

1585..3276
DNA (1692bp) protein (564aa)
Putative uncharacterized protein id=3639080 bin=GWA1_Kazan_50_15 species=Cyanothece sp. CCY0110 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
hypothetical protein
rifcsphigho2_01_scaffold_5717_4
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3308..4489)
DNA (1182bp) protein (394aa)
Glycosyltransferase id=3639083 bin=GWA1_Kazan_50_15 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation rbh
group 1 glycosyl transferase
Group 1 glycosyl transferase {ECO:0000313|EMBL:CDG65352.1}; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methano
rifcsphigho2_01_scaffold_5717_5
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4507..5421
DNA (915bp) protein (305aa)
UDP-N-acetylglucosamine 2-epimerase id=3639086 bin=GWA1_Kazan_50_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KIH75381.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="
UDP-N-acetylglucosamine 2-epimerase
rifcsphigho2_01_scaffold_5717_6
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5673..6368)
DNA (696bp) protein (232aa)
Methyltransferase type 12 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PGF4_9CYAN
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AFY32500.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
rifcsphigho2_01_scaffold_5717_7
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

6458..7456
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-N18 RepID=UPI00037645A3
hypothetical protein Tax=CG_Arma_02
hypothetical protein
rifcsphigho2_01_scaffold_5717_8

Not on your lists

comp(7507..8607)
DNA (1101bp) protein (367aa)
glycosyl transferase family 9; K02849 heptosyltransferase III [EC:2.4.-.-] id=96274 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD49668.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipopolysaccharide heptosyltransferase III
rifcsphigho2_01_scaffold_5717_9
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8703..10118
DNA (1416bp) protein (472aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R9B7_METFO
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EKF84899.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="
hypothetical protein
rifcsphigho2_01_scaffold_5717_10
Microgenomates bacterium GW2011_GWB1_45_17, Microgenomates, Bacteria

Not on your lists

comp(10132..10749)
DNA (618bp) protein (206aa)
Methyltransferase type 11 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZR6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKT98081.1}; TaxID=1618506 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_45_17.;"
methyltransferase type 11
rifcsphigho2_01_scaffold_5717_11
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

11057..13090
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037857D2
hypothetical protein Tax=GWA2_WOR_2_47_8_curated
rifcsphigho2_01_scaffold_5717_12
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(13087..13575)
DNA (489bp) protein (163aa)
hypothetical protein Tax=CG_Levy_01
hypothetical protein
hypothetical protein id=5241107 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_5717_13
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(13628..15466)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GDX3_METPE
hypothetical protein Tax=CG_Levy_01
hypothetical protein
rifcsphigho2_01_scaffold_5717_14
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15474..17417)
DNA (1944bp) protein (648aa)
Asparagine synthetase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ABE52484.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ABE52484.1};; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
Asparagine synthetase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VP2_METBU rbh
asparagine synthase, glutamine-hydrolyzing
rifcsphigho2_01_scaffold_5717_15
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17470..18786)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F59_METBF
Phytoene dehydrogenase {ECO:0000313|EMBL:AKB13217.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina the
Phytoene dehydrogenase
rifcsphigho2_01_scaffold_5717_16
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(18790..19740)
DNA (951bp) protein (317aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67737_AQUAE
dmt; dolichol-phosphate mannosyltransferase
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:AAC07699.1}; TaxID=224324 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
rifcsphigho2_01_scaffold_5717_17
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(19764..20729)
DNA (966bp) protein (322aa)
NAD-dependent epimerase/dehydratase Tax=GWA2_WOR_2_47_8_curated
NAD-dependent epimerase/dehydratase id=15191510 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
NAD-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_5717_18
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(20834..21484)
DNA (651bp) protein (217aa)
putative transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] Tax=GWA2_WOR_2_47_8_curated
Probable transaldolase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=TAL_FERNB id=1242736 bin=RBG2 species=Fervidobacterium nodosum genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG2 organism_group=Chloroflexi
putative translaldolase
rifcsphigho2_01_scaffold_5717_19
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(21486..22091)
DNA (606bp) protein (202aa)
gmhA; sedoheptulose 7-phosphate isomerase (EC:5.3.1.-); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=GWA2_WOR_2_47_8_curated
gmhA; sedoheptulose 7-phosphate isomerase (EC:5.3.1.-)
Sedoheptulose 7-phosphate isomerase n=1 Tax=uncultured bacterium RepID=K2DUQ4_9BACT
rifcsphigho2_01_scaffold_5717_20
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(22100..23083)
DNA (984bp) protein (328aa)
GHMP kinase Tax=GWA2_WOR_2_47_8_curated
GHMP kinase id=2734711 bin=GWC2_Elusimicrobia_51_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
GHMP kinase
rifcsphigho2_01_scaffold_5717_21
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(23174..23920)
DNA (747bp) protein (249aa)
Nucleotidyl transferase n=7 Tax=Clostridium thermocellum RepID=A3DED2_CLOTH
mannose-1-phosphate guanyltransferase Tax=GWA2_WOR_2_47_8_curated
nucleotidyltransferase
rifcsphigho2_01_scaffold_5717_22
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

24403..25395
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWA2_WOR_2_47_8_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TBM5_ACIB4
NAD-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_5717_23
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

25395..26699
DNA (1305bp) protein (435aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22) Tax=GWA2_WOR_2_47_8_curated
UDP-glucose 6-dehydrogenase id=2211022 bin=GWB2_Proteobacteria_55_19 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ugd; UDP-glucose 6-dehydrogenase
rifcsphigho2_01_scaffold_5717_24
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

26696..27694
DNA (999bp) protein (333aa)
Putative dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6Q5T1_9ZZZZ id=1242734 bin=RBG2 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG2 organism_group=Chloroflexi rbh
Oxidoreductase domain protein Tax=GWA2_WOR_2_47_8_curated
Oxidoreductase domain protein
rifcsphigho2_01_scaffold_5717_25
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

27696..28622
DNA (927bp) protein (309aa)
NAD-dependent epimerase/dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=GWA2_WOR_2_47_8_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IFM3_9BACL id=1242739 bin=RBG2 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
GDP-D-mannose dehydratase
rifcsphigho2_01_scaffold_5717_26
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(28617..29192)
DNA (576bp) protein (192aa)
D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D D-heptose 1 7-bisphosphate phosphatase n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5R4G1_9FIRM
histidinol-phosphate phosphatase family protein Tax=GWA2_WOR_2_47_8_curated
rifcsphigho2_01_scaffold_5717_27
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(29262..30224)
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5241116 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_5717_28
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(30273..31499)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein id=3736480 bin=GWF2_OP3_38_59 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
rifcsphigho2_01_scaffold_5717_29
GWA1_OP11_39_12_plus, Woesebacteria, Microgenomates, Bacteria

Not on your lists

31614..32351
DNA (738bp) protein (246aa)
Glycosyltransferases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D278_PELTS
Glycosyltransferase {ECO:0000313|EMBL:KKQ98119.1}; TaxID=1618549 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_39_12.;"
WcaA; glycosyltransferases
rifcsphigho2_01_scaffold_5717_30
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32379..33035
DNA (657bp) protein (219aa)
Putative S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thiomonas sp. 3As RepID=D6CVA6_9BURK id=71822 bin=ACD50 species=Thiomonas arsenitoxydans genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
phospholipid/glycerol acyltransferase
Tax=BJP_IG2069_Desfulfarculales_53_13
Displaying items 1-30 of 31 in total

View Taxonomy