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rifcsphigho2_01_scaffold_14739

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_14739_1
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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comp(95..367)
DNA (273bp) protein (91aa)
Uncharacterized protein id=2893899 bin=GWF2_Ignavibacteria_33_9 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein; K09728 hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
Hypothetical protein
rifcsphigho2_01_scaffold_14739_2
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(395..1168)
DNA (774bp) protein (258aa)
3'-5' exoribonuclease Tax=GWA2_OP11_46_7
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
rifcsphigho2_01_scaffold_14739_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1168..1878)
DNA (711bp) protein (237aa)
Probable exosome complex exonuclease 1 Tax=AR11
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome complex exonuclease Rrp41
rifcsphigho2_01_scaffold_14739_4
unknown

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comp(1898..2311)
DNA (414bp) protein (138aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14739_5

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comp(2313..3002)
DNA (690bp) protein (230aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
rifcsphigho2_01_scaffold_14739_6
unknown

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comp(3014..3307)
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14739_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3318..4022)
DNA (705bp) protein (235aa)
Predicted exosome subunit Tax=AR11
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative exosome subunit
rifcsphigho2_01_scaffold_14739_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4031..4783)
DNA (753bp) protein (251aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha Tax=AR11
Proteasome subunit alpha
rifcsphigho2_01_scaffold_14739_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4820..5188)
DNA (369bp) protein (123aa)
ribonuclease P protein component 2 Tax=CG_Woesearch_02
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribonuclease P protein component 2
rifcsphigho2_01_scaffold_14739_10
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(5280..6626)
DNA (1347bp) protein (449aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=CG_Pacearch_05
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase id=1250126 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
rifcsphigho2_01_scaffold_14739_11
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6628..7065)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PL67_9ZZZZ
Putative uncharacterized protein Tax=RBG_13_Actinobacteria_35_12_curated
rifcsphigho2_01_scaffold_14739_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7046..7336)
DNA (291bp) protein (97aa)
Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_14739_13
unknown

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7476..7652
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14739_14
unknown

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7688..7906
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14739_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8041..8901)
DNA (861bp) protein (287aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=5048689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Nucleotidyl transferase Tax=AR11
rifcsphigho2_01_scaffold_14739_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

8974..9978
DNA (1005bp) protein (335aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=5044229 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
fructose-1,6-bisphosphatase (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=AR4
glpX; fructose 1,6-bisphosphatase II
rifcsphigho2_01_scaffold_14739_17

Not on your lists

10261..11301
DNA (1041bp) protein (347aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C7A4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD70139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_01_scaffold_14739_18

Not on your lists

11303..12316
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=G3P_METST
Displaying 18 items

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