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rifcsphigho2_01_scaffold_7270

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_7270_1
unknown

Not on your lists

comp(169..606)
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7270_2

Not on your lists

comp(622..912)
DNA (291bp) protein (97aa)
Marine sediment metagenome DNA, contig: S01H1_S33219 {ECO:0000313|EMBL:GAG31697.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_7270_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(970..2019)
DNA (1050bp) protein (350aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=GWF2_RBX1_38_17_curated
Putative methylthioribose-1-phosphate isomerase id=2119466 bin=GWE2_RBX1_39_32 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
S-methyl-5-thioribose-1-phosphate isomerase
rifcsphigho2_01_scaffold_7270_4
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2124..2651
DNA (528bp) protein (176aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=GWF2_Bacteroidetes_35_48_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
rifcsphigho2_01_scaffold_7270_5
unknown

Not on your lists

comp(2653..2970)
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7270_6

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comp(3436..4713)
DNA (1278bp) protein (426aa)
Translation initiation factor 2 subunit 3 {ECO:0000313|EMBL:KHO51155.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 2 subunit gamma
rifcsphigho2_01_scaffold_7270_7
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists


comp(5021..5500)
DNA (480bp) protein (160aa)
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=GWA2_WOR_2_47_8_curated
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S6e
rifcsphigho2_01_scaffold_7270_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5558..7282)
DNA (1725bp) protein (575aa)
Potassium transporter n=2 Tax=Pandoraea RepID=V5UB27_9BURK
transporter, CPA2 family; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=AR11
potassium transporter
rifcsphigho2_01_scaffold_7270_9
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

7533..10124
DNA (2592bp) protein (864aa)
PGAP1 family protein Tax=GWA2_WOR_2_47_8_curated
PGAP1 family protein id=5799748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PGAP1 family protein
rifcsphigho2_01_scaffold_7270_10

Not on your lists

10246..10524
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z3U2_9EURY id=5103684 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62962.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_7270_11

Not on your lists

10521..10859
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CE64A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62963.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_7270_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(10844..11890)
DNA (1047bp) protein (349aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87
mechanosensitive ion channel MscS Tax=CG_Pacearch_01
MscS mechanosensitive ion channel
rifcsphigho2_01_scaffold_7270_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11943..12467)
DNA (525bp) protein (175aa)
Ribosomal protein L16 Tax=AR11
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L10e
rifcsphigho2_01_scaffold_7270_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12596..13162
DNA (567bp) protein (189aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_7270_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13164..13376
DNA (213bp) protein (71aa)
hypothetical protein Tax=AR11
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_7270_16

Not on your lists

13440..13595
DNA (156bp) protein (52aa)
Marine sediment metagenome DNA, contig: S01H1_S25145 {ECO:0000313|EMBL:GAG24474.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_7270_17

Not on your lists

13600..14106
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003716170
Marine sediment metagenome DNA, contig: S03H2_C00951 {ECO:0000313|EMBL:GAH27123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_01_scaffold_7270_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

14152..14475
DNA (324bp) protein (108aa)
trx-5; thioredoxin; K03671 thioredoxin 1 id=14425971 bin=bin1_lowGC species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
trx-5; thioredoxin; K03671 thioredoxin 1 Tax=CSP1_2_Dadabacteria
thiol-disulfide isomerase/thioredoxin domain-containing protein
rifcsphigho2_01_scaffold_7270_19
unknown

Not on your lists

14582..14740
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7270_20
Pristionchus pacificus, Pristionchus, Diplogasterida, Chromadorea, Nematoda, Metazoa

Not on your lists

14743..15141
DNA (399bp) protein (133aa)
Major sperm protein {ECO:0000256|RuleBase:RU003425}; TaxID=54126 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Diplogasterida; Neodiplogasteridae; Pristionchus.;" source="Pristionchus
rifcsphigho2_01_scaffold_7270_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15143..15808
DNA (666bp) protein (222aa)
TIGR01906 family protein n=2 Tax=Clostridium RepID=D4CDU9_9CLOT
TIGR01906 family protein Tax=AR11
integral membrane protein TIGR01906
rifcsphigho2_01_scaffold_7270_22
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

15830..16852
DNA (1023bp) protein (341aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
rifcsphigho2_01_scaffold_7270_23
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

Not on your lists

16849..17121
DNA (273bp) protein (91aa)
Extracellular matrix protein n=1 Tax=Polysphondylium pallidum RepID=D3BR65_POLPA
Uncharacterized protein {ECO:0000313|EMBL:EFA75894.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;
rifcsphigho2_01_scaffold_7270_24
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

17161..17889
DNA (729bp) protein (243aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S313_DESTD
rifcsphigho2_01_scaffold_7270_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18032..18598)
DNA (567bp) protein (189aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_7270_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18600..19421)
DNA (822bp) protein (274aa)
hypothetical protein Tax=AR11
id=5046759 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_7270_27
Candidatus Babela massiliensis, Candidatus Babela, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19487..19774
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=delta proteobacterium BABL1 RepID=V6DJL0_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK30701.1}; TaxID=673862 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Babela.;" source="Candidatus Babela massiliensis.;"
rifcsphigho2_01_scaffold_7270_28
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20253..20741
DNA (489bp) protein (163aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9W5_METEZ
rifcsphigho2_01_scaffold_7270_29
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

20750..21064
DNA (315bp) protein (105aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=AR19
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7
methylated-DNA--protein-cysteine methyltransferase
rifcsphigho2_01_scaffold_7270_30
unknown

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comp(21072..21338)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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