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rifcsphigho2_01_scaffold_8884

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_8884_1
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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2..571
DNA (570bp) protein (190aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Glutamyl-tRNA(Gln) amidotransferase subunit D id=5800300 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsphigho2_01_scaffold_8884_2
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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655..1089
DNA (435bp) protein (145aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5240589 bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_8884_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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1089..1328
DNA (240bp) protein (80aa)
hypothetical protein
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
id=5103880 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_8884_4
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1393..2313
DNA (921bp) protein (307aa)
UPI0003D1B8B6 related cluster n=1 Tax=unknown RepID=UPI0003D1B8B6
Uncharacterized protein {ECO:0000313|EMBL:ETA67934.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tinda
filamentation induced by cAMP protein Fic
rifcsphigho2_01_scaffold_8884_5
AR11, Woesearchaeaota, DPANN, Archaea

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2347..3780
DNA (1434bp) protein (478aa)
glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=AR11
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5049650 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_01_scaffold_8884_6

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3823..4065
DNA (243bp) protein (81aa)
Marine sediment metagenome DNA, contig: S01H1_S00172 {ECO:0000313|EMBL:GAF98317.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Putative uncharacterized protein id=3087969 bin=GWA2_OP3_53_43 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
rifcsphigho2_01_scaffold_8884_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4630..5004
DNA (375bp) protein (125aa)
atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EX50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59607.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
rifcsphigho2_01_scaffold_8884_8
AR15, Woesearchaeaota, DPANN, Archaea

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5006..6835
DNA (1830bp) protein (610aa)
V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATPase 116 kDa subunit id=5800548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
V-type ATPase 116 kDa subunit Tax=AR15
rifcsphigho2_01_scaffold_8884_9
AR15, Woesearchaeaota, DPANN, Archaea

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6852..7088
DNA (237bp) protein (79aa)
H(+)-transporting ATP synthase, subunit K id=5800549 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H(+)-transporting ATP synthase, subunit K Tax=AR15
H+-transporting two-sector ATPase, C subunit
rifcsphigho2_01_scaffold_8884_10

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7097..7642
DNA (546bp) protein (182aa)
V-type ATP synthase subunit E id=5800550 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
V-type ATP synthase subunit E {ECO:0000313|EMBL:AJF61881.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Archaeal/vacuolar-type H+-ATPase subunit E
rifcsphigho2_01_scaffold_8884_11

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7644..8726
DNA (1083bp) protein (361aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ATP synthase A1, C subunit
rifcsphigho2_01_scaffold_8884_12

Not on your lists

8729..9028
DNA (300bp) protein (100aa)
V-type ATP synthase subunit F; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] id=5042342 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_8884_13

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9031..10755
DNA (1725bp) protein (575aa)
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] id=5042341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1579365 species="Archaea.
atpA; A(1)A(0)-type ATP synthase, subunit A (EC:3.6.3.14)
rifcsphigho2_01_scaffold_8884_14
AR11, Woesearchaeaota, DPANN, Archaea

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10877..12247
DNA (1371bp) protein (457aa)
V-type ATP synthase subunit B (EC:3.6.3.14); K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] Tax=AR11
atpB-1; A-type ATP synthase subunit B (EC:3.6.3.14); K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] id=5042340 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpB-1; A-type ATP synthase subunit B (EC:3.6.3.14)
rifcsphigho2_01_scaffold_8884_15

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12275..12892
DNA (618bp) protein (206aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5042339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpD-1; A-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_8884_16
unknown

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12897..13061
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8884_17

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13125..15071
DNA (1947bp) protein (649aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=5042338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
vacuolar-type H(+)-translocating pyrophosphatase
rifcsphigho2_01_scaffold_8884_18
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15116..16276
DNA (1161bp) protein (387aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262801 species="Bacteria;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:389 RepID=R7LU33_9CLOT
rifcsphigho2_01_scaffold_8884_19
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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16348..16575
DNA (228bp) protein (76aa)
Transcription regulator SpoVT/AbrB family n=1 Tax=Thermococcus sp. AM4 RepID=G2M2E4_9EURY
transcription regulator SpoVT/AbrB family
Transcription regulator SpoVT/AbrB family {ECO:0000313|EMBL:AEO13975.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcu
rifcsphigho2_01_scaffold_8884_20
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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16577..16996
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6UY96_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN03565.1}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
rifcsphigho2_01_scaffold_8884_21
AR1, Pacearchaeaota, DPANN, Archaea

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16999..17610
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
hypothetical protein Tax=AR1
Displaying 21 items

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