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rifcsphigho2_01_scaffold_5799

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5799_1
AR11, Woesearchaeaota, DPANN, Archaea

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732..977
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A
DNA-directed RNA polymerase subunit H Tax=AR11
DNA-directed RNA polymerase, subunit H
rifcsphigho2_01_scaffold_5799_2
AR11, Woesearchaeaota, DPANN, Archaea

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970..2457
DNA (1488bp) protein (496aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_5799_3

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2649..4451
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_5799_4

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4607..5764
DNA (1158bp) protein (386aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO53420.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
rifcsphigho2_01_scaffold_5799_5
AR11, Woesearchaeaota, DPANN, Archaea

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5834..8527
DNA (2694bp) protein (898aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_5799_6

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8529..8813
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53421.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
rifcsphigho2_01_scaffold_5799_7

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8840..9223
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
NusA protein-like protein {ECO:0000313|EMBL:KHO53422.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NusA family KH domain protein, archaeal
rifcsphigho2_01_scaffold_5799_8
AR11, Woesearchaeaota, DPANN, Archaea

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9273..9710
DNA (438bp) protein (146aa)
30S ribosomal protein S12 Tax=AR11
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsphigho2_01_scaffold_5799_9
CG_Woesearch_02, Woesearchaeota, Archaea

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9798..10397
DNA (600bp) protein (200aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=CG_Woesearch_02
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
rifcsphigho2_01_scaffold_5799_10
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(10399..11010)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZJE8_9ZZZZ
Uncharacterized protein Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_5799_11
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(10986..11576)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ELM9_9BACT
hypothetical protein Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_5799_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(11672..12217)
DNA (546bp) protein (182aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_01_scaffold_5799_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12217..12792)
DNA (576bp) protein (192aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_01_scaffold_5799_14
unknown

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comp(12803..15691)
DNA (2889bp) protein (963aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5799_15
CG_Woesearch_02, Woesearchaeota, Archaea

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15773..16558
DNA (786bp) protein (262aa)
hypothetical protein Tax=CG_Woesearch_02
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
fibronectin-binding protein
rifcsphigho2_01_scaffold_5799_16

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16579..17064
DNA (486bp) protein (162aa)
N-acetyltransferase GCN5 id=18248783 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
N-acetyltransferase GCN5 {ECO:0000313|EMBL:KHO47618.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_01_scaffold_5799_17

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17069..17884
DNA (816bp) protein (272aa)
Marine sediment metagenome DNA, contig: S01H1_S00061 {ECO:0000313|EMBL:GAF97319.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_5799_18

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17884..18477
DNA (594bp) protein (198aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) RepID=C3MTS5_SULIM
Marine sediment metagenome DNA, contig: S01H1_S30658 {ECO:0000313|EMBL:GAG32627.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
carbohydrate kinase
rifcsphigho2_01_scaffold_5799_19
unknown

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18527..19321
DNA (795bp) protein (265aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5799_20
AR11, Woesearchaeaota, DPANN, Archaea

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19352..19480
DNA (129bp) protein (43aa)
Sugar kinase, YjeF-related protein family Tax=AR11
Displaying 20 items

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