ggKbase home page

rifcsphigho2_01_scaffold_4038

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4038_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_2

Not on your lists

comp(102..557)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54930.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Uncharacterized protein id=4242141 bin=GWC2_OD1_43_27 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
rifcsphigho2_01_scaffold_4038_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(559..2262)
DNA (1704bp) protein (568aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RBG_13_Pacearchaeota_33_26_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWC9_9CLOT
rifcsphigho2_01_scaffold_4038_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2350..2523
DNA (174bp) protein (58aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_4038_5
unknown

Not on your lists

2580..3011
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_6
unknown

Not on your lists

comp(3319..3702)
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_7
unknown

Not on your lists

comp(3874..4146)
DNA (273bp) protein (91aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4370..4951
DNA (582bp) protein (194aa)
Marine sediment metagenome DNA, contig: S01H1_S22588 Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_4038_9
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

4941..5465
DNA (525bp) protein (175aa)
Tax=AR13
rifcsphigho2_01_scaffold_4038_10
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

5490..5972
DNA (483bp) protein (161aa)
Tax=AR13
rifcsphigho2_01_scaffold_4038_11
unknown

Not on your lists

5972..6508
DNA (537bp) protein (179aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_12

Not on your lists

6508..7071
DNA (564bp) protein (188aa)
hypothetical protein id=2175630 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:KHO50820.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsphigho2_01_scaffold_4038_13
unknown

Not on your lists

7114..7947
DNA (834bp) protein (278aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

8044..9570
DNA (1527bp) protein (509aa)
ATPase, type IV secretory pathway VirB11 component like protein Tax=CG_Pacearch_05
Type IV secretory pathway, VirB11 component and related ATPase involved in archaeal flagella biosynthesis id=5800481 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
gsp-10; putative type II secretion system protein
rifcsphigho2_01_scaffold_4038_15
unknown

Not on your lists

9721..9897
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4038_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9887..11248
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382D20B
archaeal flagella assembly protein J Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_4038_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11248..12123
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372C98B
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=RBG_13_Pacearchaeota_36_9_curated
type II secretion system protein
rifcsphigho2_01_scaffold_4038_18
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

12125..12781
DNA (657bp) protein (219aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_4038_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12778..13185
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S12H4_L02200 Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsphigho2_01_scaffold_4038_20
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

13366..13788
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
transposase; K07491 putative transposase Tax=CG_Pacearch_01
Mobile element protein
rifcsphigho2_01_scaffold_4038_21
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

13858..14268
DNA (411bp) protein (137aa)
hypothetical protein Tax=CG_Pacearch_01
rifcsphigho2_01_scaffold_4038_22
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

14312..15136
DNA (825bp) protein (275aa)
id=5045985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_4038_23
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

15233..18682
DNA (3450bp) protein (1150aa)
exported protein of unknown function Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
Rhs family protein id=5043762 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_4038_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18684..21347
DNA (2664bp) protein (888aa)
Tripartite motif-containing protein 71 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_4038_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

21406..22050
DNA (645bp) protein (215aa)
small GTP-binding protein; K06883 Tax=RBG_13_Pacearchaeota_36_9_curated
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsphigho2_01_scaffold_4038_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

22104..22496
DNA (393bp) protein (131aa)
hypothetical protein
hypothetical protein; K09743 hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Putative uncharacterized protein id=5044929 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_4038_27
unknown

Not on your lists

22548..22946
DNA (399bp) protein (133aa)

This feature has no annotations

Displaying 27 items

View Taxonomy