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rifcsphigho2_01_scaffold_4921

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4921_1
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(3..686)
DNA (684bp) protein (228aa)
prolyl-tRNA synthetase (EC:6.1.1.16); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AB39E
prolyl-tRNA synthetase
rifcsphigho2_01_scaffold_4921_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(723..2219)
DNA (1497bp) protein (499aa)
carboxypeptidase Taq (EC:3.4.17.19)
thermostable carboxypeptidase 1 (EC:3.4.17.19); K01299 carboxypeptidase Taq [EC:3.4.17.19] id=5241307 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Zn-dependent carboxypeptidase Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_4921_3
unknown

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2369..2725
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_4

Not on your lists

2729..5329
DNA (2601bp) protein (867aa)
calcium-transporting ATPase 1 (EC:3.6.3.8)
ATPase n=1 Tax=Thermoanaerobacter indiensis RepID=UPI000360F532
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:KHO52769.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsphigho2_01_scaffold_4921_5

Not on your lists

5326..5610
DNA (285bp) protein (95aa)
Marine sediment metagenome DNA, contig: S01H4_S08537 {ECO:0000313|EMBL:GAG95318.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_4921_6
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

5612..5812
DNA (201bp) protein (67aa)
hypothetical protein Tax=AR13
rifcsphigho2_01_scaffold_4921_7
unknown

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5858..6358
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_8
unknown

Not on your lists

comp(6532..7320)
DNA (789bp) protein (263aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_9
unknown

Not on your lists

comp(7448..7768)
DNA (321bp) protein (107aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_10
unknown

Not on your lists

comp(7774..7923)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_11
unknown

Not on your lists

comp(7872..7976)
DNA (105bp) protein (35aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_12
unknown

Not on your lists

comp(8047..8871)
DNA (825bp) protein (275aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_13
unknown

Not on your lists

comp(8914..9612)
DNA (699bp) protein (233aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_14
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9711..10430
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003615558
btpA family protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsphigho2_01_scaffold_4921_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10461..10955
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI00035CABF1
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_4921_16
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

10961..11392
DNA (432bp) protein (144aa)
Tax=CG_Omnitr_04
rifcsphigho2_01_scaffold_4921_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(11385..13031)
DNA (1647bp) protein (549aa)
phenylalanyl-tRNA synthetase Tax=CG_Pacearch_06
Phenylalanine--tRNA ligase beta subunit id=5800823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_01_scaffold_4921_18
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(13028..13810)
DNA (783bp) protein (261aa)
type 11 methyltransferase id=5802015 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Methyltransferase type 11 Tax=zPERA2_38_36
type 11 methyltransferase
rifcsphigho2_01_scaffold_4921_19
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13810..14103)
DNA (294bp) protein (98aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Thermincola potens (strain JR) RepID=D5X894_THEPJ
MazG nucleotide pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:ADG82814.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (st
rifcsphigho2_01_scaffold_4921_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(14105..14299)
DNA (195bp) protein (65aa)
hypothetical protein Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_4921_21
unknown

Not on your lists

comp(14300..14590)
DNA (291bp) protein (97aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(14593..16125)
DNA (1533bp) protein (511aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Phenylalanine-tRNA ligase alpha subunit
rifcsphigho2_01_scaffold_4921_23
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(16159..16611)
DNA (453bp) protein (151aa)
ribonuclease P (EC:3.1.26.5); K03539 ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] Tax=CG_Pacearch_02
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI00037FD0AF
Ribonuclease P protein component 3
rifcsphigho2_01_scaffold_4921_24
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16671..17378)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034CF3F3
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACL20505.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobac
rifcsphigho2_01_scaffold_4921_25
unknown

Not on your lists

comp(17502..18209)
DNA (708bp) protein (236aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4921_26

Not on your lists

18376..18840
DNA (465bp) protein (155aa)
DNA polymerase beta domain-containing protein; K07075 id=5041690 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47942.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA polymerase beta domain-containing protein
rifcsphigho2_01_scaffold_4921_27
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

18837..19181
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPJ9_9FIRM
Putative uncharacterized protein Tax=AR13
hypothetical protein
rifcsphigho2_01_scaffold_4921_28

Not on your lists

19228..19761
DNA (534bp) protein (178aa)
cytidyltransferase (EC:2.7.7.3)
Uncharacterized protein {ECO:0000313|EMBL:KKN87591.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=3688777 bin=PER_GWC2_41_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_4921_29
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19758..20441)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI000380E5E9
uridylate kinase, putative Tax=RBG_13_Pacearchaeota_33_26_curated
uridylate kinase
rifcsphigho2_01_scaffold_4921_30
unknown

Not on your lists

20555..20929
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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