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rifcsphigho2_01_scaffold_8978

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_8978_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(15..1379)
DNA (1365bp) protein (455aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor Tax=RBG_13_Pacearchaeota_36_9_curated
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle GTPase
rifcsphigho2_01_scaffold_8978_2

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1514..2185
DNA (672bp) protein (224aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000313|EMBL:EFK97896.1}; EC=5.4.2.1 {ECO:0000313|EMBL:EFK97896.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecologica
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=sediment metagenome RepID=D9PEW0_9ZZZZ
phosphoglycerate mutase
rifcsphigho2_01_scaffold_8978_3

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2354..2986
DNA (633bp) protein (211aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YNQ5_9BACT
Marine sediment metagenome DNA, contig: S01H1_L04355 {ECO:0000313|EMBL:GAF84066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_8978_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2983..3540
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_8978_5
unknown

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comp(3746..3934)
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8978_6

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comp(4363..4506)
DNA (144bp) protein (48aa)
Marine sediment metagenome DNA, contig: S12H4_S22684 {ECO:0000313|EMBL:GAJ22520.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_8978_7

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comp(4507..4941)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L753_MAGSM
Uncharacterized protein {ECO:0000313|EMBL:KHO48583.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
hypothetical protein
rifcsphigho2_01_scaffold_8978_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4904..5392)
DNA (489bp) protein (163aa)
ndk2; putative nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E6367
nucleoside-diphosphate kinase
rifcsphigho2_01_scaffold_8978_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(5400..6185)
DNA (786bp) protein (262aa)
SSU ribosomal protein S3AE
rps3AE; 30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae Tax=RBG_13_Pacearchaeota_36_9_curated
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_8978_10

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comp(6187..6501)
DNA (315bp) protein (105aa)
Marine sediment metagenome DNA, contig: S01H1_L00093 {ECO:0000313|EMBL:GAF78226.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L44E; K02929 large subunit ribosomal protein L44e id=5048709 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_8978_11

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6575..6850
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50334.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsphigho2_01_scaffold_8978_12
CG_Pacearch_05, Pacearchaeota, Archaea

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7060..7854
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003770312
hypothetical protein Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_8978_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(8278..9138)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Tax=RBG_13_Pacearchaeota_36_9_curated
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_01_scaffold_8978_14

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comp(9129..9620)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN29432.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=5050168 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_01_scaffold_8978_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9697..11541
DNA (1845bp) protein (615aa)
id=5103088 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_8978_16
unknown

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11525..11830
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8978_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11820..17627
DNA (5808bp) protein (1936aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Lytic murein transglycosylase Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_8978_18
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

17680..18033
DNA (354bp) protein (118aa)
Tax=AR19
rifcsphigho2_01_scaffold_8978_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18397..19332)
DNA (936bp) protein (312aa)
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Pacearchaeota_36_9_curated
Transcription initiation factor IIB id=5799701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription initiation factor IIB
rifcsphigho2_01_scaffold_8978_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

19571..19867
DNA (297bp) protein (99aa)
Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_8978_21
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(19854..20042)
DNA (189bp) protein (63aa)
Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_8978_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(20094..20459)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00036C1A36
30S ribosomal protein S8; K02995 small subunit ribosomal protein S8e Tax=RBG_13_Pacearchaeota_36_9_curated
30S ribosomal protein S8
rifcsphigho2_01_scaffold_8978_23
unknown

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20903..21673
DNA (771bp) protein (257aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8978_24
GWA1_OD1_36_12, Parcubacteria, Bacteria

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21678..22577
DNA (900bp) protein (300aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AXK1_NATA1
Putative aspartoacylase {ECO:0000313|EMBL:KKP93360.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
succinylglutamate desuccinylase
rifcsphigho2_01_scaffold_8978_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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22574..23722
DNA (1149bp) protein (383aa)
Histidine--tRNA ligase n=1 Tax=Solibacillus silvestris (strain StLB046) RepID=F2F2E0_SOLSS
histidyl-tRNA synthetase Tax=RBG_13_Pacearchaeota_33_26_curated
Histidine-tRNA ligase
rifcsphigho2_01_scaffold_8978_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(23892..24581)
DNA (690bp) protein (230aa)
Methyltransferase type 11 n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0B2_DEHLB id=5103090 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Methyltransferase type 11
rifcsphigho2_01_scaffold_8978_27
unknown

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24641..24736
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 27 items

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