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rifcsphigho2_01_scaffold_5244

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5244_1
unknown

Not on your lists

607..786
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_2
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

1330..2088
DNA (759bp) protein (253aa)
Translation initiation factor 2 subunit alpha
translation initiation factor 2 subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=AR19
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 id=5047465 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_5244_3
GWC2_OD1_35_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2143..3216)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F1D01
Uncharacterized protein {ECO:0000313|EMBL:KKP88239.1}; TaxID=1618752 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_8.;"
rifcsphigho2_01_scaffold_5244_4
unknown

Not on your lists

comp(3334..3501)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_5
unknown

Not on your lists

3628..4464
DNA (837bp) protein (279aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4494..5516)
DNA (1023bp) protein (341aa)
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA Tax=RBG_13_Pacearchaeota_36_9_curated
DNA repair and recombination RadA-like protein; K04483 DNA repair protein RadA id=5043016 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA repair and recombination protein RadA
rifcsphigho2_01_scaffold_5244_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5883..6344)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8EEE
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5244_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6525..7457)
DNA (933bp) protein (311aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAS3_METIK id=5103126 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 Tax=RBG_13_Pacearchaeota_36_9_curated
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsphigho2_01_scaffold_5244_9

Not on your lists

7559..7831
DNA (273bp) protein (91aa)
Elongation factor 1-beta {ECO:0000256|SAAS:SAAS00044427}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta id=5043735 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_5244_10

Not on your lists

7985..8611
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC40_9FIRM id=5103135 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S12H4_S22439 {ECO:0000313|EMBL:GAJ20878.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsphigho2_01_scaffold_5244_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8613..9455)
DNA (843bp) protein (281aa)
peptidase A24B, FlaK domain-containing protein; K07991 archaeal preflagellin peptidase FlaK [EC:3.4.23.52] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F8341
Peptidase A24A prepilin type IV
rifcsphigho2_01_scaffold_5244_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9500..9868)
DNA (369bp) protein (123aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5244_13
unknown

Not on your lists

comp(9849..9971)
DNA (123bp) protein (41aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(10035..10463)
DNA (429bp) protein (143aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5244_15
unknown

Not on your lists

comp(10482..10934)
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_16
unknown

Not on your lists

comp(10927..11607)
DNA (681bp) protein (227aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11604..12113)
DNA (510bp) protein (170aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5244_18
unknown

Not on your lists

comp(12103..12495)
DNA (393bp) protein (131aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_19
unknown

Not on your lists

comp(12495..12722)
DNA (228bp) protein (76aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_20

Not on your lists

comp(12722..13726)
DNA (1005bp) protein (335aa)
Marine sediment metagenome DNA, contig: S06H3_L01445 {ECO:0000313|EMBL:GAI04522.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_5244_21
unknown

Not on your lists

comp(13726..13836)
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_22
unknown

Not on your lists

comp(13836..14384)
DNA (549bp) protein (183aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_23
unknown

Not on your lists

comp(14381..15001)
DNA (621bp) protein (207aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_24
unknown

Not on your lists

comp(15003..15164)
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5244_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(15196..17355)
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003682E3E
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_5244_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17461..19737)
DNA (2277bp) protein (759aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA38_9EURY id=5103114 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_5244_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

19829..20194
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUC2_9EURY id=5103113 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Marine sediment metagenome DNA, contig: S03H2_S09202 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5244_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

20196..21038
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A9CC3
hypothetical protein
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5244_29
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(21077..21586)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C85AB
hypothetical protein
id=5103111 Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_5244_30
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(21593..22075)
DNA (483bp) protein (161aa)
transmembrane_regions Tax=RBG_13_Pacearchaeota_33_26_curated
Displaying items 1-30 of 39 in total

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