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rifcsphigho2_01_scaffold_12484

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_12484_1
R_PER_ii_49_16, PER-ii, Bacteria

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comp(2..322)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC31_NITGG
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
hypothetical protein
rifcsphigho2_01_scaffold_12484_2

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491..1093
DNA (603bp) protein (201aa)
Nitroreductase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z9V8_9GAMM
Nitroreductase {ECO:0000313|EMBL:KHO49828.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
nitroreductase
rifcsphigho2_01_scaffold_12484_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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1136..2419
DNA (1284bp) protein (428aa)
seryl-tRNA synthetase (EC:6.1.1.11) Tax=RBG_16_Pacearchaeota_35_8_curated
seryl-tRNA synthetase (EC:6.1.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036938B4
rifcsphigho2_01_scaffold_12484_4
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

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2425..2727
DNA (303bp) protein (101aa)
putative pyrophosphatase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
rifcsphigho2_01_scaffold_12484_5
GWC2_CPR2_39_10, CPR2, Bacteria

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2763..3095
DNA (333bp) protein (111aa)
CsaA protein id=2888331 bin=GWC1_CPR2_39_9 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
CsaA protein Tax=GWC2_CPR2_39_10
csaA; export chaperone protein CsaA
rifcsphigho2_01_scaffold_12484_6
R_RIF_OD1_02_44_13, RIF-OD1-2, Parcubacteria, Bacteria

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comp(3109..4044)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C1C8F
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_02_44_13_curated
rifcsphigho2_01_scaffold_12484_7
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4213..4644
DNA (432bp) protein (144aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Me
rifcsphigho2_01_scaffold_12484_8
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

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4751..4945
DNA (195bp) protein (65aa)
cold-shock protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003672520
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KKQ84172.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
cold-shock DNA-binding domain-containing protein
rifcsphigho2_01_scaffold_12484_9

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5073..6509
DNA (1437bp) protein (479aa)
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000313|EMBL:KHO47921.1}; EC=6.3.5.7 {ECO:0000313|EMBL:KHO47921.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_01_scaffold_12484_10
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(6594..8360)
DNA (1767bp) protein (589aa)
Excinuclease ABC subunit C n=1 Tax=uncultured archaeon GZfos17F1 RepID=Q64DT7_9ARCH
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
uvrC; excinuclease ABC subunit C
rifcsphigho2_01_scaffold_12484_11
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8441..9760
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; A
yclM; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1XZX4_ANEAE
rifcsphigho2_01_scaffold_12484_12
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9796..12633)
DNA (2838bp) protein (946aa)
UvrABC system protein A n=2 Tax=uncultured archaeon RepID=Q2Y4L7_9ARCH
excinuclease ABC subunit A
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsphigho2_01_scaffold_12484_13
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12919..13902)
DNA (984bp) protein (328aa)
putative low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003671426 rbh
hypothetical protein
rifcsphigho2_01_scaffold_12484_14
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(13944..15869)
DNA (1926bp) protein (642aa)
UvrABC system protein B n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=UVRB_METMA
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=GWA2_WOR_2_47_8_curated
Excinuclease ABC subunit B
rifcsphigho2_01_scaffold_12484_15
CG_Pacearch_05, Pacearchaeota, Archaea

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15915..16991
DNA (1077bp) protein (359aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=CG_Pacearch_05
shikimate 5-dehydrogenase/shikimate kinase (EC:1.1.1.25)
Shikimate 5-dehydrogenase/shikimate kinase id=3012479 bin=GWC1_OD1_38_17 species=Butyrivibrio proteoclasticus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rifcsphigho2_01_scaffold_12484_16
unknown

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17034..17162
DNA (129bp) protein (43aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6D6_METSL Tax=AR20
Displaying 16 items

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