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rifcsphigho2_01_scaffold_6854_15

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_39_22

partial RP 35 / 55 MC: 2 BSCG 5 / 51 ASCG 30 / 38
Location: 13660..14352

Top 3 Functional Annotations

Value Algorithm Source
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 223.0
  • Bit_score: 260
  • Evalue 1.20e-66
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO Tax=AR20 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 223.0
  • Bit_score: 260
  • Evalue 1.70e-66
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 223.0
  • Bit_score: 260
  • Evalue 3.40e-67

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Taxonomy

Sequences

DNA sequence
Length: 693
ATGAGTTTACTTATCAAAGAAAAACAACTTGTCATCCCTGGTGAGACCCTTGCTAAGGGTATGGATTTTGTGCCGTCTGATGGCACTTATCGGGATGGTGACGAGATTGTTTGCGGTCAACTTGGCCTTATTTCTGTTCATGGCCGTGTTTTACGCATTATTCCCCTTGCTGGGCGTTATATACCAAGAGAAGAGGACGTTGTCATCGGCCGTGTAGTAAACATGAGCCTGTCTAGCTGGCAAATTGATATTGGTTATGCATATGAAGCCAACCTCTCGCTAAGAGACGCTTCTTCTGATTTTATTGAACGCGGAAGTGACCTTGCAAAATACTATGATTTTGGCGATATTGTTACCTGCAAGGTTATTCAGGTGAACCGTGCTAAGTTTGTTGACCTTACTGTTAAGGGTCCAGGTCTTAAAAAACTTAAGGGTGGGCGCATTATCAACATTTCTATTGCTAAGATTCCACGCGTTATCGGCAAACAGGGAAGTATGGTTTCTCTTATAAAACAAGTTACAGGCTGTGAGATTACCATCGGTCAGAATGGAAGGGTCTGGATTTCAGGTGAACCTGAAAAAGAGTATTTAGCAGAGCGTTCTATTTACCTTGTTGAGCGAGAACCACAACATGTTGGTCTTACTGATAAGGTTAAGGCTTTTCTTGAGCGCGGAGGGGTTGATGGCAAGTAA
PROTEIN sequence
Length: 231
MSLLIKEKQLVIPGETLAKGMDFVPSDGTYRDGDEIVCGQLGLISVHGRVLRIIPLAGRYIPREEDVVIGRVVNMSLSSWQIDIGYAYEANLSLRDASSDFIERGSDLAKYYDFGDIVTCKVIQVNRAKFVDLTVKGPGLKKLKGGRIINISIAKIPRVIGKQGSMVSLIKQVTGCEITIGQNGRVWISGEPEKEYLAERSIYLVEREPQHVGLTDKVKAFLERGGVDGK*