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rifcsphigho2_01_scaffold_6854_17

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_39_22

partial RP 35 / 55 MC: 2 BSCG 5 / 51 ASCG 30 / 38
Location: 15054..15836

Top 3 Functional Annotations

Value Algorithm Source
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=AR17 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 257.0
  • Bit_score: 284
  • Evalue 1.60e-73
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 260.0
  • Bit_score: 290
  • Evalue 2.10e-75
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 254.0
  • Bit_score: 265
  • Evalue 1.60e-68

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Taxonomy

AR17 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 783
ATGGCAAATAAGTCACTTGATTATATCACAAGCCTTTTACAAAAGGGCATACGCTTTGATGAGCGCTCTTTAGAGGCGTATCGTGAGCCGATTGTTGTTGAGAGGGTAATTTCTCCAAGATCTTCAGAGGGTTCAGCACGCGTTAAAATTGCTGGGACAGAGGTTGTTGCCGGTGTAAAACTTAGTGTTGGCGAACCTTATCCAGATACTCCTGATGAGGGTTCTATTGTTGTTAATGTTGAACTTATACCCCTTGCTTCTCCTGAATTTGAAACAGGCCCTCCTGATGTTGCTGCTGTTGAGCTTTCACGTGTTGTTGACAGGGCTATTCGCGAGTCTGGCGCTCTTGATATGAAGAAGCTTTGCGTTAAATCTGGTGAGAAGATCTGGATGGTATTTATTGATATTTATCCTCTCAATGATAATGGTAACCTTTTTGATGCTTGTGCTCTTGCATCTATTGCTGCTTTGCAGGATGCAAAGTTTCCTAAGTATGATGCAAAGACTGGTATTGTTGACTATAGTTCTTCATCAAATAAAGGTCTTCCTATTGTTCGGCTTCCAATCTCTTGTACGGTCCTTAAGGTTGGTCAGCAATACCTTGTTGATCCCTCTTTTGAGGAAGAGCAGGCTCTTGATGCCCGCTTGACTATTGCTGTTGCTGACGGTAAAATCTGCGCCATGCAAAAGGGGGGGGATGGTGCCTTGACTTTTGAAGATATTCAAAAGATGGTTGACATTGCTTTTCGCTCAACAGAATTATTGCGGAGGAAGTTAGAATGA
PROTEIN sequence
Length: 261
MANKSLDYITSLLQKGIRFDERSLEAYREPIVVERVISPRSSEGSARVKIAGTEVVAGVKLSVGEPYPDTPDEGSIVVNVELIPLASPEFETGPPDVAAVELSRVVDRAIRESGALDMKKLCVKSGEKIWMVFIDIYPLNDNGNLFDACALASIAALQDAKFPKYDAKTGIVDYSSSSNKGLPIVRLPISCTVLKVGQQYLVDPSFEEEQALDARLTIAVADGKICAMQKGGDGALTFEDIQKMVDIAFRSTELLRRKLE*