ggKbase home page

rifcsphigho2_01_scaffold_13311

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_13311_1
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1..618)
DNA (618bp) protein (206aa)
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsphigho2_01_scaffold_13311_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

712..1269
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C3364
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_01_scaffold_13311_3
unknown

Not on your lists

comp(1472..2215)
DNA (744bp) protein (248aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13311_4
unknown

Not on your lists

2322..2819
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13311_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3279..3545
DNA (267bp) protein (89aa)
Putative toxin RelE4 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RELE4_METJA id=5103771 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:KCZ70919.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Metha
hypothetical protein
rifcsphigho2_01_scaffold_13311_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


3599..4660
DNA (1062bp) protein (354aa)
Cell division like protein pelota; K06965 protein pelota Tax=AR9
cell division protein; K06965 protein pelota id=5046363 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mRNA surveillance protein Pelota
rifcsphigho2_01_scaffold_13311_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

4824..5621
DNA (798bp) protein (266aa)
hypothetical protein Tax=AR9
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_13311_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


5752..7272
DNA (1521bp) protein (507aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=AR9
Phenylalanine--tRNA ligase alpha subunit id=5800822 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase alpha subunit
rifcsphigho2_01_scaffold_13311_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


7274..8944
DNA (1671bp) protein (557aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=AR9
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_01_scaffold_13311_10
unknown

Not on your lists

comp(8987..9541)
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13311_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(9609..9968)
DNA (360bp) protein (120aa)
50S ribosomal protein L14; K02875 large subunit ribosomal protein L14e Tax=AR9
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14e
rifcsphigho2_01_scaffold_13311_12

Not on your lists

comp(10375..11139)
DNA (765bp) protein (255aa)
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46823.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_13311_13
unknown

Not on your lists

comp(11265..11963)
DNA (699bp) protein (233aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13311_14

Not on your lists

comp(12259..12609)
DNA (351bp) protein (117aa)
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
Displaying 14 items

View Taxonomy