ggKbase home page

rifcsphigho2_01_scaffold_10906

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_10906_1
unknown

Not on your lists

comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10906_2
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(133..648)
DNA (516bp) protein (172aa)
Uncharacterized HAD-hydrolase MK0970 n=2 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Y970_METKA
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
HAD superfamily hydrolase
rifcsphigho2_01_scaffold_10906_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(638..1606)
DNA (969bp) protein (323aa)
hypothetical protein Tax=AR9
UPF0052 protein CA_C0512 id=4120776 bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
hypothetical protein
rifcsphigho2_01_scaffold_10906_4
unknown

Not on your lists

comp(1675..2625)
DNA (951bp) protein (317aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10906_5

Not on your lists


comp(2674..3276)
DNA (603bp) protein (201aa)
30S ribosomal protein S2 {ECO:0000256|SAAS:SAAS00084186}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S2 id=5799985 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S2
rifcsphigho2_01_scaffold_10906_6
unknown

Not on your lists

comp(3422..4114)
DNA (693bp) protein (231aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10906_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4324..4995)
DNA (672bp) protein (224aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein radB; K04484 DNA repair protein RadB Tax=AR9
DNA repair and recombination protein RadB
rifcsphigho2_01_scaffold_10906_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

5069..6559
DNA (1491bp) protein (497aa)
hypothetical protein
Uncharacterized protein id=5050179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsphigho2_01_scaffold_10906_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

6565..8013
DNA (1449bp) protein (483aa)
hypothetical protein
id=5103317 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR9
rifcsphigho2_01_scaffold_10906_10

Not on your lists

8010..9269
DNA (1260bp) protein (420aa)
glycosyl transferase family 2 id=5041883 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glycosyl transferase family 2 {ECO:0000313|EMBL:KHO47311.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Glycosyltransferase involved in cell wall biogenesis
rifcsphigho2_01_scaffold_10906_11
unknown

Not on your lists

comp(9368..10039)
DNA (672bp) protein (224aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10906_12
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

10138..10821
DNA (684bp) protein (228aa)
Thioredoxin-like fold id=5800033 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Thioredoxin-like fold Tax=AR15
rifcsphigho2_01_scaffold_10906_13
unknown

Not on your lists

10923..11258
DNA (336bp) protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10906_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

11255..11851
DNA (597bp) protein (199aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=AR17
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Exonuclease RNase T and DNA polymerase III id=5047365 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_10906_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11922..12377)
DNA (456bp) protein (152aa)
XRE family transcriptional regulator; K03627 putative transcription factor Tax=AR9
Putative transcription factor, MBF1 like protein id=5800236 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcriptional regulator
rifcsphigho2_01_scaffold_10906_16
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

12476..13678
DNA (1203bp) protein (401aa)
ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme); K15231 ATP-citrate lyase beta-subunit [EC:2.3.3.8] Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
ATPase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B51091
ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme)
Displaying 16 items

View Taxonomy