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rifcsphigho2_01_scaffold_11706

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_11706_1
unknown

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comp(3..722)
DNA (720bp) protein (240aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11706_2
GWA1_OD1_36_12, Parcubacteria, Bacteria

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876..1277
DNA (402bp) protein (134aa)
Putative uncharacterized protein Tax=GWA1_OD1_36_12
hypothetical protein; K07108 id=5048372 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_11706_3
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

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1271..3889
DNA (2619bp) protein (873aa)
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
rifcsphigho2_01_scaffold_11706_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3955..5133
DNA (1179bp) protein (393aa)
SufBD protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYQ3_9EURY
SufBD protein {ECO:0000313|EMBL:EFW90319.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
SufBD protein
rifcsphigho2_01_scaffold_11706_5

Not on your lists

5168..6379
DNA (1212bp) protein (404aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Cysteine desulfurase n=1 Tax=Enterococcus faecium EnGen0127 RepID=R1W985_ENTFC
SufS subfamily cysteine desulfurase
rifcsphigho2_01_scaffold_11706_6
RBG_16_CPR_42_10_curated, Bacteria

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6376..6834
DNA (459bp) protein (153aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUE0_HERA2
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_CPR_42_10_curated
NifU family SUF system FeS assembly protein
rifcsphigho2_01_scaffold_11706_7
GWA2_PER_47_7, Peregrinibacteria, Bacteria

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6837..7601
DNA (765bp) protein (255aa)
FeS assembly ATPase SufC n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZM9_RUBXD
FeS assembly ATPase SufC {ECO:0000313|EMBL:KKU80573.1}; TaxID=1619058 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_47_7.;"
FeS assembly ATPase SufC
rifcsphigho2_01_scaffold_11706_8

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7598..7885
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52915.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Putative uncharacterized protein id=5800618 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
aromatic ring hydroxylating enzyme
rifcsphigho2_01_scaffold_11706_9
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

7907..8638
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBZ2_9ACTN
cupin Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
Cupin 2 conserved barrel domain protein
rifcsphigho2_01_scaffold_11706_10
unknown

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8662..9132
DNA (471bp) protein (157aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11706_11

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comp(8992..9588)
DNA (597bp) protein (199aa)
hypothetical protein id=5048111 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45156.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
phage antirepressor protein
rifcsphigho2_01_scaffold_11706_12
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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comp(9645..10802)
DNA (1158bp) protein (386aa)
putative dehydrogenase Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
slp:Slip_0643 FAD dependent oxidoreductase id=1242060 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative dehydrogenase
rifcsphigho2_01_scaffold_11706_13

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comp(11037..11426)
DNA (390bp) protein (130aa)
Uncharacterized protein id=5800381 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61712.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_01_scaffold_11706_14
CG_Pacearch_03, Pacearchaeota, Archaea

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11513..11737
DNA (225bp) protein (75aa)
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_11706_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

11734..12102
DNA (369bp) protein (123aa)
PIN protein
PIN domain-containing protein Tax=CG_Pacearch_03
PIN domain-containing protein id=5044626 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_11706_16
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12102..12449
DNA (348bp) protein (116aa)
Ribonuclease P protein component 4 n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGC9_METFS
RNase P subunit RPR2 Tax=BJP_IG2102_Methanoregula_52_95
RNase P subunit RPR2
rifcsphigho2_01_scaffold_11706_17
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(12451..13035)
DNA (585bp) protein (195aa)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Woesearch_03
Phosphoenolpyruvate synthase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMC5_THEBM
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_11706_18
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(12998..14722)
DNA (1725bp) protein (575aa)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Woesearch_03
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYP1_METKA
rifcsphigho2_01_scaffold_11706_19
unknown

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comp(14848..15069)
DNA (222bp) protein (74aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11706_20

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comp(15184..15633)
DNA (450bp) protein (150aa)
folA; FolA (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] id=3251 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
FolA {ECO:0000313|EMBL:EKE15548.1}; EC=1.5.1.3 {ECO:0000313|EMBL:EKE15548.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Bifunctional deaminase-reductase protein
rifcsphigho2_01_scaffold_11706_21
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(15761..16237)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A6D1A
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
hypothetical protein
rifcsphigho2_01_scaffold_11706_22
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(16224..16808)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037322E7
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
rifcsphigho2_01_scaffold_11706_23
AR17, Woesearchaeaota, DPANN, Archaea

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comp(17106..17984)
DNA (879bp) protein (293aa)
Tax=AR17
rifcsphigho2_01_scaffold_11706_24
unknown

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comp(17981..19717)
DNA (1737bp) protein (579aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11706_25
AR17, Woesearchaeaota, DPANN, Archaea

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comp(19743..20630)
DNA (888bp) protein (296aa)
Tax=AR17
rifcsphigho2_01_scaffold_11706_26
unknown

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comp(20627..20848)
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 26 items

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