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rifcsphigho2_01_scaffold_15424

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_15424_1

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2..478
DNA (477bp) protein (159aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
rifcsphigho2_01_scaffold_15424_2

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574..822
DNA (249bp) protein (83aa)
Superfamily II helicase id=5800426 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Superfamily II helicase {ECO:0000313|EMBL:AJF61757.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
ski2-like helicase
rifcsphigho2_01_scaffold_15424_3

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1011..1526
DNA (516bp) protein (172aa)
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Large subunit ribosomal protein L10e {ECO:0000313|EMBL:KHO46354.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rpl10e; 50S ribosomal protein L10
rifcsphigho2_01_scaffold_15424_4
Rhizopus delemar, Rhizopus, Mucorales, Fungi

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comp(1503..2600)
DNA (1098bp) protein (366aa)
FK506-binding protein 4; EC=5.2.1.8;; Peptidyl-prolyl cis-trans isomerase; Short=PPIase;; Rotamase; TaxID=246409 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucor
FK506-binding protein 4 n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) RepID=FKBP4_RHIO9
rifcsphigho2_01_scaffold_15424_5
AR15, Woesearchaeaota, DPANN, Archaea

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comp(2647..3648)
DNA (1002bp) protein (334aa)
Small GTP-binding protein id=5800537 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Small GTP-binding protein Tax=AR15
Ribosomal protein L27
rifcsphigho2_01_scaffold_15424_6
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(3997..5706)
DNA (1710bp) protein (570aa)
sodium/hydrogen exchanger Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
sodium/hydrogen exchanger id=5043948 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_15424_7
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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5772..6977
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein; K08971 putative membrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
hypothetical protein
rifcsphigho2_01_scaffold_15424_8
AR10, Diapherotrites, DPANN, Archaea

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7236..7610
DNA (375bp) protein (125aa)
hypothetical protein
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PIN domain-like Tax=AR10
rifcsphigho2_01_scaffold_15424_9
unknown

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comp(7661..8254)
DNA (594bp) protein (198aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15424_10
unknown

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comp(8251..9009)
DNA (759bp) protein (253aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15424_11

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9122..9676
DNA (555bp) protein (185aa)
Predicted transcription regulator, containing CBS domains n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JGL2_PYRKO id=5102981 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative transcription regulator, containing CBS protein
Putative transcription regulator, containing CBS protein {ECO:0000313|EMBL:AJF62262.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_15424_12
R_OD1_Kaiserbacteria_49_16, Kaiserbacteria, Parcubacteria, Bacteria

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9946..10182
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_16_curated
rifcsphigho2_01_scaffold_15424_13
unknown

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10311..11570
DNA (1260bp) protein (420aa)
metK-1; S-adenosylmethionine synthetase (EC:2.5.1.6)
rifcsphigho2_01_scaffold_15424_14
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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11567..12745
DNA (1179bp) protein (393aa)
metK; methionine adenosyltransferase (EC:2.5.1.6)
Methionine adenosyltransferase {ECO:0000313|EMBL:AJA93248.1}; EC=2.5.1.6 {ECO:0000313|EMBL:AJA93248.1};; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidat
Methionine adenosyltransferase 1 (AdoMet synthetase) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV90_9ARCH
rifcsphigho2_01_scaffold_15424_15
unknown

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comp(12747..12962)
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15424_16
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12968..14173)
DNA (1206bp) protein (402aa)
hypothetical protein Tax=GWE2_Bacteroidetes_39_28_curated
Putative uncharacterized protein id=1803443 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
rifcsphigho2_01_scaffold_15424_17

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comp(14170..15054)
DNA (885bp) protein (295aa)
phosphoribosyl transferase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=5042287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KHO46785.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KHO46785.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
rifcsphigho2_01_scaffold_15424_18
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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15156..16805
DNA (1650bp) protein (550aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=869211 species="Bacteria; Spirochae
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365A573
lysyl-tRNA synthetase
rifcsphigho2_01_scaffold_15424_19
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

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16824..17009
DNA (186bp) protein (62aa)
Cytidine deaminase-like 11..137 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
Displaying 19 items

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