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rifcsphigho2_01_scaffold_31095

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_31095_1
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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comp(2..535)
DNA (534bp) protein (178aa)
NYN domain protein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RLD9_9DELT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
hypothetical protein
rifcsphigho2_01_scaffold_31095_2
unknown

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914..1501
DNA (588bp) protein (196aa)

This feature has no annotations

rifcsphigho2_01_scaffold_31095_3
unknown

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comp(1396..1719)
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsphigho2_01_scaffold_31095_4
AR9, Woesearchaeaota, DPANN, Archaea

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comp(1761..2075)
DNA (315bp) protein (105aa)
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=AR9
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S10
rifcsphigho2_01_scaffold_31095_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2220..3512)
DNA (1293bp) protein (431aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=AR9
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 1-alpha
rifcsphigho2_01_scaffold_31095_6
unknown

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comp(3690..4541)
DNA (852bp) protein (284aa)

This feature has no annotations

rifcsphigho2_01_scaffold_31095_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4626..6881)
DNA (2256bp) protein (752aa)
translation elongation factor aEF-2; K03234 elongation factor 2 Tax=AR11
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2
rifcsphigho2_01_scaffold_31095_8
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6943..8340)
DNA (1398bp) protein (466aa)
FusA; elongation factor EF-2; K03234 elongation factor 2 id=5051527 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
FusA; elongation factor EF-2; K03234 elongation factor 2 Tax=AR18
FusA; elongation factor EF-2
rifcsphigho2_01_scaffold_31095_9
unknown

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comp(8351..8812)
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsphigho2_01_scaffold_31095_10
R_RIF_OD1_12_48_12, RIF-OD1-12, Parcubacteria, Bacteria

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comp(8823..9320)
DNA (498bp) protein (166aa)
ndk2; putative nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045753 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_31095_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(9546..9854)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=AR9
30S ribosomal protein S28e
rifcsphigho2_01_scaffold_31095_12

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comp(9909..10223)
DNA (315bp) protein (105aa)
50S ribosomal protein L7, large subunit ribosomal protein L7Ae {ECO:0000313|EMBL:KHO49134.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L7Ae id=5800777 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L7Ae
rifcsphigho2_01_scaffold_31095_13

Not on your lists

10443..11117
DNA (675bp) protein (225aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUY6_9BACT id=5103795 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO52816.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
ABC transport system protein
rifcsphigho2_01_scaffold_31095_14

Not on your lists

11135..12019
DNA (885bp) protein (295aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52815.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
id=5103794 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_31095_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12040..13224
DNA (1185bp) protein (395aa)
Uncharacterized protein n=3 Tax=Methanococcus maripaludis RepID=A4FZ02_METM5 id=5103793 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein Tax=AR17
hypothetical protein
rifcsphigho2_01_scaffold_31095_16

Not on your lists

comp(13284..14003)
DNA (720bp) protein (240aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T1BYW8_9ZZZZ
Transposase IS4 family protein {ECO:0000313|EMBL:EQD74917.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 16 items

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