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rifcsphigho2_01_scaffold_23022

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_23022_1
unknown

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_2

Not on your lists

275..790
DNA (516bp) protein (172aa)
Nucleotidyltransferase id=5800070 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61401.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_01_scaffold_23022_3
Bacillus alcalophilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

836..1543
DNA (708bp) protein (236aa)
Pyroglutamyl-peptidase I {ECO:0000256|SAAS:SAAS00130640}; EC=3.4.19.3 {ECO:0000256|SAAS:SAAS00130640};; TaxID=1218173 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" sourc
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TN88_BACAO
rifcsphigho2_01_scaffold_23022_4
unknown

Not on your lists

1649..2287
DNA (639bp) protein (213aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_5

Not on your lists


2351..2947
DNA (597bp) protein (199aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=5049216 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KHO45207.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO45207.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA-directed RNA polymerase subunit E
rifcsphigho2_01_scaffold_23022_6
unknown

Not on your lists

3000..3221
DNA (222bp) protein (74aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_7

Not on your lists

3351..3833
DNA (483bp) protein (161aa)
30S ribosomal protein S24e n=1 Tax=sediment metagenome RepID=D9PM37_9ZZZZ
30S ribosomal protein S24e {ECO:0000313|EMBL:EFK95393.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
30S ribosomal protein S24e
rifcsphigho2_01_scaffold_23022_8
unknown

Not on your lists

3873..4217
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(4234..4803)
DNA (570bp) protein (190aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-binding protein
rifcsphigho2_01_scaffold_23022_10
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4881..5249)
DNA (369bp) protein (123aa)
hypothetical protein
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
rifcsphigho2_01_scaffold_23022_11
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(5308..5598)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5051516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e
rifcsphigho2_01_scaffold_23022_12
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5878..6834)
DNA (957bp) protein (319aa)
Putative uncharacterized protein id=5800161 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
rifcsphigho2_01_scaffold_23022_13
unknown

Not on your lists

comp(6878..7834)
DNA (957bp) protein (319aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_14
unknown

Not on your lists

comp(8142..8741)
DNA (600bp) protein (200aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_15
unknown

Not on your lists

8970..9806
DNA (837bp) protein (279aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_16

Not on your lists

9803..10177
DNA (375bp) protein (125aa)
id=5047532 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45741.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_23022_17
unknown

Not on your lists

10193..10720
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_18
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(10731..11312)
DNA (582bp) protein (194aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
rifcsphigho2_01_scaffold_23022_19
unknown

Not on your lists

11374..12270
DNA (897bp) protein (299aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_20

Not on your lists

comp(12587..12811)
DNA (225bp) protein (75aa)
seg id=5800541 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61872.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_01_scaffold_23022_21
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12821..13381)
DNA (561bp) protein (187aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
rifcsphigho2_01_scaffold_23022_22
unknown

Not on your lists

comp(13459..14478)
DNA (1020bp) protein (340aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14584..15432)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F8341
type IV leader peptidase family protein Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_23022_24

Not on your lists

comp(15534..15872)
DNA (339bp) protein (113aa)
hypothetical protein id=5042184 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO48137.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsphigho2_01_scaffold_23022_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15863..16147)
DNA (285bp) protein (95aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5042183 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsphigho2_01_scaffold_23022_26
unknown

Not on your lists

16415..16522
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_27
unknown

Not on your lists

16519..17610
DNA (1092bp) protein (364aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23022_28
Leptospira alexanderi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17615..18199
DNA (585bp) protein (195aa)
Peptidase, M23 family n=1 Tax=Leptospira alexanderi serovar Manhao 3 str. L 60 RepID=V6IG13_9LEPT
Peptidase, M23 family {ECO:0000313|EMBL:EQA64273.1}; TaxID=1049759 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira alexanderi serovar Manhao 3 str. L 6
metalloendopeptidase
rifcsphigho2_01_scaffold_23022_29

Not on your lists

comp(18235..18702)
DNA (468bp) protein (156aa)
hypothetical protein
id=5103856 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63134.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_23022_30
unknown

Not on your lists

comp(18699..19256)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA id=5103857 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA Tax=AR20
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy