ggKbase home page

rifcsplowo2_01_scaffold_22247

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_22247_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

2..343
-----------------
DNA (342bp)
protein (114aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=AR17
rifcsplowo2_01_scaffold_22247_2
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

820..2835
-----------------
DNA (2016bp)
protein (672aa)
Tax=AR17
rifcsplowo2_01_scaffold_22247_3
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2832..3629)
-----------------
DNA (798bp)
protein (266aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=AR17
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=5048844 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase ATP-hydrolyzing
rifcsplowo2_01_scaffold_22247_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3623..3853)
-----------------
DNA (231bp)
protein (77aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=AR17
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=5048844 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase ATP-hydrolyzing
rifcsplowo2_01_scaffold_22247_5
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3846..5519)
-----------------
DNA (1674bp)
protein (558aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=AR17
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048845 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase VI, subunit B
rifcsplowo2_01_scaffold_22247_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(5562..6158)
-----------------
DNA (597bp)
protein (199aa)
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=AR17
Putative uncharacterized protein n=1 Tax=Nosema ceranae (strain BRL01) RepID=C4V6R8_NOSCE id=5103153 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_22247_7
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(6155..7513)
-----------------
DNA (1359bp)
protein (453aa)
GTP-binding signal recognition particle SRP54 G-domain protein; K03106 signal recognition particle subunit SRP54 Tax=AR17
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
SRP54-type protein, GTPase protein
rifcsplowo2_01_scaffold_22247_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

7569..8042
-----------------
DNA (474bp)
protein (158aa)
Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIH0_9GAMM id=68940 bin=ACD49 species=Reinekea blandensis genus=Reinekea taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_22247_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7914..8165)
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029B04DA
hypothetical protein
Tax=AR17
rifcsplowo2_01_scaffold_22247_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8220..8546)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035E6024
hypothetical protein Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_22247_11

Not on your lists

comp(8598..9755)
-----------------
DNA (1158bp)
protein (386aa)
Signal recognition particle GTPase n=1 Tax=sediment metagenome RepID=D9PEV9_9ZZZZ id=5103150 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Signal recognition particle GTPase
rifcsplowo2_01_scaffold_22247_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

9897..10979
-----------------
DNA (1083bp)
protein (361aa)
putative arginase/deacetylase Tax=AR17
UPI0003D7A3F8 related cluster id=8266888 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
putative arginase/deacetylase
rifcsplowo2_01_scaffold_22247_13
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

11102..12109
-----------------
DNA (1008bp)
protein (336aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-] Tax=AR17
collagenase; K08303 putative protease [EC:3.4.-.-] id=5048279 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptidase U32
rifcsplowo2_01_scaffold_22247_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12102..12323
-----------------
DNA (222bp)
protein (74aa)
Ferredoxin III Tax=AR17
Ferredoxin III id=5048278 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_22247_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12320..13180)
-----------------
DNA (861bp)
protein (287aa)
tRNA pseudouridine synthase D; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR17
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
tRNA pseudouridine synthase D
rifcsplowo2_01_scaffold_22247_16
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13177..13752)
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AC5BB
gpmA; putative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Tax=AR17
phosphoglycerate mutase, BPG-dependent, family 1
rifcsplowo2_01_scaffold_22247_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

13868..14425
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein
Uncharacterized protein Tax=AR17
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_22247_18
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

14412..14729
-----------------
DNA (318bp)
protein (106aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e Tax=AR17
50S ribosomal protein L44e id=5800650 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L44E
rifcsplowo2_01_scaffold_22247_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

14731..14907
-----------------
DNA (177bp)
protein (59aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=AR17
30S ribosomal protein S27e
rifcsplowo2_01_scaffold_22247_20
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

14941..15735
-----------------
DNA (795bp)
protein (265aa)
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 Tax=AR17
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 2 subunit alpha
rifcsplowo2_01_scaffold_22247_21
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15732..15893
-----------------
DNA (162bp)
protein (54aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZY4_9EURY
RNA-binding protein Nop10p; K11130 H/ACA ribonucleoprotein complex subunit 3 Tax=AR17
RNA-binding protein Nop10p
rifcsplowo2_01_scaffold_22247_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15963..16727
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07159 Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_22247_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16796..17956)
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein
id=5103139 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR17
rifcsplowo2_01_scaffold_22247_24
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


18006..19073
-----------------
DNA (1068bp)
protein (356aa)
cell division protein; K06965 protein pelota Tax=AR17
cell division protein; K06965 protein pelota id=5046363 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mRNA surveillance protein Pelota
rifcsplowo2_01_scaffold_22247_25
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19065..20126)
-----------------
DNA (1062bp)
protein (354aa)
geranylgeranyl reductase Tax=AR17
geranylgeranyl reductase id=5050661 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Geranylgeranyl reductase
rifcsplowo2_01_scaffold_22247_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

20428..21258
-----------------
DNA (831bp)
protein (277aa)
type IV leader peptidase family protein; K07991 archaeal preflagellin peptidase FlaK [EC:3.4.23.52] Tax=AR17
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F8341
Peptidase A24A prepilin type IV
rifcsplowo2_01_scaffold_22247_27
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21255..21866)
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376AB69
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_22247_28
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

21910..22440
-----------------
DNA (531bp)
protein (177aa)
id=5048311 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR17
Displaying 28 items

View Taxonomy