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rifcsplowo2_01_scaffold_1813

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1813_1

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3..803
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=2 Tax=uncultured archaeon RepID=D1J9M4_9ARCH id=5103866 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63144.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1813_2
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(864..2084)
DNA (1221bp) protein (407aa)
iron-sulfur binding protein Tax=RBG_13_Nitrospirae_39_12_curated
Putative uncharacterized protein id=2188921 bin=GWB2_Proteobacteria_55_19 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
iron-sulfur binding protein
rifcsplowo2_01_scaffold_1813_3
unknown

Not on your lists

comp(2130..3161)
DNA (1032bp) protein (344aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1813_4
unknown

Not on your lists

comp(3328..3606)
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1813_5
R_WWE3_40_23, WWE3, Bacteria

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comp(3664..4935)
DNA (1272bp) protein (424aa)
id=4189491 Tax=RIFCSPHIGHO2_01_FULL_WWE3_40_23_curated
rifcsplowo2_01_scaffold_1813_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(4975..5901)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=unclassified Thermoplasmatales RepID=M7TVS6_9EURY
hypothetical protein; K07027 Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsplowo2_01_scaffold_1813_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5932..7389)
DNA (1458bp) protein (486aa)
radical SAM protein Tax=RBG_13_Pacearchaeota_33_26_curated
Fe-S oxidoreductase id=4511050 bin=GWC2_Deltaproteobacteria_42_51 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Fe-S-oxidoreductase
rifcsplowo2_01_scaffold_1813_8
unknown

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comp(7386..8612)
DNA (1227bp) protein (409aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KX96_9EURY id=5103426 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Polysaccharide biosynthesis protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KX96_9EURY Tax=AR20
Polysaccharide biosynthesis protein
rifcsplowo2_01_scaffold_1813_9

Not on your lists

comp(8613..9608)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003693E69
Glycosyl transferase family 4
Glycosyl transferase family 4 {ECO:0000313|EMBL:AJF62708.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1813_10

Not on your lists

comp(9660..11993)
DNA (2334bp) protein (778aa)
PKD domain-containing protein id=5045745 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
PKD protein {ECO:0000313|EMBL:KHO54412.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_1813_11
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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12138..13172
DNA (1035bp) protein (345aa)
Fe-S oxidoreductase n=3 Tax=Sulfolobus acidocaldarius RepID=M1ISR4_9CREN
Fe-S oxidoreductase
Predicted Fe-S oxidoreductases {ECO:0000313|EMBL:AAY79712.1}; TaxID=330779 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius (
rifcsplowo2_01_scaffold_1813_12
unknown

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13221..13385
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1813_13
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

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13372..14094
DNA (723bp) protein (241aa)
Glycosyl transferase family protein n=1 Tax=uncultured bacterium RepID=K2EPQ7_9BACT
family 2 glycosyl transferase; K07027 Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
Glycosyl transferase family 2
rifcsplowo2_01_scaffold_1813_14
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14087..15460)
DNA (1374bp) protein (458aa)
radical SAM protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
Radical SAM domain protein id=4349814 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Staphylothermus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Radical SAM domain-containing protein
rifcsplowo2_01_scaffold_1813_15
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(15457..16935)
DNA (1479bp) protein (493aa)
cobalamin B12-binding domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Uncharacterized protein id=4375269 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
cobalamin B12-binding domain-containing protein
rifcsplowo2_01_scaffold_1813_16
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

17036..18577
DNA (1542bp) protein (514aa)
hypothetical protein
id=5103436 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_1813_17
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(18574..19542)
DNA (969bp) protein (323aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RBG_13_OP3X_46_9_curated
hypothetical protein
putative glycosyltransferase id=5241085 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_1813_18
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(19539..20630)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI000373BD13
Fe-S oxidoreductase Tax=RBG_13_OP3X_46_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_1813_19
unknown

Not on your lists

comp(20674..23316)
DNA (2643bp) protein (881aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D05C0
I WGS project CAKM00000000 data, strain SE8, contig 279 n=1 Tax=Pneumocystis jiroveci (strain SE8) RepID=L0PFJ0_PNEJ8 Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_1813_20
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23326..24222)
DNA (897bp) protein (299aa)
id=5049552 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
rifcsplowo2_01_scaffold_1813_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

24291..24977
DNA (687bp) protein (229aa)
ABC transporter n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003817438
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Micrarchaeota_49_10_curated
Cell division transporter, ATP-binding protein FtsE
rifcsplowo2_01_scaffold_1813_22
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

24985..25854
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035EB916
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_1813_23
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

25851..27071
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382730D
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_1813_24

Not on your lists

27105..28442
DNA (1338bp) protein (446aa)
peptidase U62, modulator of DNA gyrase; K03568 TldD protein id=5045293 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TldD protein {ECO:0000313|EMBL:KHO54500.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
peptidase U62 modulator of DNA gyrase
rifcsplowo2_01_scaffold_1813_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

28439..29701
DNA (1263bp) protein (421aa)
peptidase u62 modulator of DNA gyrase; K03592 PmbA protein id=5045294 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptidase u62 modulator of DNA gyrase; K03592 PmbA protein Tax=AR18
peptidase u62 modulator of DNA gyrase
rifcsplowo2_01_scaffold_1813_26

Not on your lists

29946..30116
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I717_METCZ id=5103534 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62815.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1813_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30157..30831)
DNA (675bp) protein (225aa)
TM helix repeat-containing protein id=5045740 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TM helix repeat-containing protein Tax=AR18
Conserved TM helix repeat-containing protein
rifcsplowo2_01_scaffold_1813_28

Not on your lists

comp(30972..32090)
DNA (1119bp) protein (373aa)
RNA methylase n=3 Tax=Sulfolobus acidocaldarius RepID=Q4J9A5_SULAC id=5103052 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase
RNA methylase {ECO:0000313|EMBL:AJF62333.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1813_29

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comp(32343..33068)
DNA (726bp) protein (242aa)
Peptidase U32 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BB03_METIK
Uncharacterized protein {ECO:0000313|EMBL:KHO50719.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
peptidase U32
Displaying 29 items

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