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rifcsplowo2_01_scaffold_19350

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_19350_1
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Pacearch_04
replication factor C large subunit; K04800 replication factor C large subunit id=5047300 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_19350_2
unknown

Not on your lists

229..378
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19350_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(433..1506)
DNA (1074bp) protein (358aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Pacearch_03
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rfc; replication factor C small subunit
rifcsplowo2_01_scaffold_19350_4
unknown

Not on your lists

comp(1512..1790)
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19350_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1899..3383
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3J5X0_STRPU
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsplowo2_01_scaffold_19350_6

Not on your lists

comp(3400..4251)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362FDBE
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO48246.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_19350_7
unknown

Not on your lists

4345..4701
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19350_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

4703..5038
DNA (336bp) protein (112aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

5103..5687
DNA (585bp) protein (195aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=AR6
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ileS; isoleucyl-tRNA synthetase
rifcsplowo2_01_scaffold_19350_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

5777..7225
DNA (1449bp) protein (483aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=AR6
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_19350_11
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

7261..7815
DNA (555bp) protein (185aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=AR6
Isoleucine--tRNA ligase n=2 Tax=Dictyoglomus RepID=B5YF35_DICT6 id=5103221 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Isoleucine-tRNA ligase
rifcsplowo2_01_scaffold_19350_12
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

8014..8247
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F17D2
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_19350_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

8213..8794
DNA (582bp) protein (194aa)
NEQ098 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MK1_NANEQ id=5102985 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_19350_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8810..9379)
DNA (570bp) protein (190aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9376..9768)
DNA (393bp) protein (131aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_16
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9795..10031)
DNA (237bp) protein (79aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_17
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10211..10780
DNA (570bp) protein (190aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5M3_9FIRM
rifcsplowo2_01_scaffold_19350_18
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

11069..11398
DNA (330bp) protein (110aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR6
rifcsplowo2_01_scaffold_19350_19
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(11391..11525)
DNA (135bp) protein (45aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_20
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

11633..12187
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C0FA7
Tax=AR6
rifcsplowo2_01_scaffold_19350_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

12270..12509
DNA (240bp) protein (80aa)
Putative antitoxin Ferp_1029 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXH8_FERPA
hypothetical protein
Tax=AR6
rifcsplowo2_01_scaffold_19350_22
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

12493..12867
DNA (375bp) protein (125aa)
PilT protein domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYZ9_FERPA
PilT protein domain protein; K07062 Tax=AR6
PilT protein domain protein
rifcsplowo2_01_scaffold_19350_23
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

13067..13372
DNA (306bp) protein (102aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDN6_ARCPA
CopG family transcriptional regulator Tax=AR6
CopG family transcriptional regulator
rifcsplowo2_01_scaffold_19350_24
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

13403..13885
DNA (483bp) protein (161aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF12_9EURY
hypothetical protein Tax=AR6
putative nucleic acid-binding protein, contains PIN domain
rifcsplowo2_01_scaffold_19350_25
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

14000..14455
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AI01_9BACT
Tax=AR6
rifcsplowo2_01_scaffold_19350_26
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

14585..15028
DNA (444bp) protein (148aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_27
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

15107..15661
DNA (555bp) protein (185aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_28
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15667..15954)
DNA (288bp) protein (96aa)
transmembrane_regions id=5042182 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Tax=AR6
rifcsplowo2_01_scaffold_19350_29
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15951..16208)
DNA (258bp) protein (86aa)
Tax=AR6
rifcsplowo2_01_scaffold_19350_30
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16296..16523)
DNA (228bp) protein (76aa)
Tax=AR6
Displaying items 1-30 of 36 in total

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