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rifcsplowo2_01_scaffold_10897

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10897_1
unknown

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comp(2..160)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10897_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

745..1365
DNA (621bp) protein (207aa)
hypothetical protein
id=5102959 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR6
rifcsplowo2_01_scaffold_10897_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

1362..2018
DNA (657bp) protein (219aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis 8.8.11 RepID=M1XRD6_9EURY id=5102960 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR6
ArsR family transcription regulator
rifcsplowo2_01_scaffold_10897_4

Not on your lists

comp(2086..3336)
DNA (1251bp) protein (417aa)
Transglutaminase protein
Transglutaminase protein {ECO:0000313|EMBL:KHO45163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_10897_5

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comp(3320..3973)
DNA (654bp) protein (218aa)
Transglutaminase domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8ICE3_SULAT id=5102934 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transglutaminase protein
Transglutaminase protein {ECO:0000313|EMBL:AJF62215.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_10897_6
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

4069..4428
DNA (360bp) protein (120aa)
Uncharacterized protein id=1987012 bin=GWB2_Ignavibacteria_35_12 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
rifcsplowo2_01_scaffold_10897_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


4792..5175
DNA (384bp) protein (128aa)
translation initiation factor 5A; K03263 translation initiation factor 5A id=5041911 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
translation initiation factor 5A; K03263 translation initiation factor 5A Tax=AR4
Efp; translation initiation factor IF-5A
rifcsplowo2_01_scaffold_10897_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5341..5676)
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S12H4_L01165 Tax=CG_Woesearch_02
coiled-coil id=5241406 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_10897_9
unknown

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5910..6305
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10897_10

Not on your lists

6462..7274
DNA (813bp) protein (271aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1579371 species="Archaea.;" source="archae
RNase HII id=5800606 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribonuclease
rifcsplowo2_01_scaffold_10897_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7319..10855
DNA (3537bp) protein (1179aa)
Chromosome partition protein Smc Tax=AR11
chromosome segregation ATPase; K03529 chromosome segregation protein id=5044048 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_10897_12

Not on your lists

comp(10895..11569)
DNA (675bp) protein (225aa)
Glycosyltransferase n=1 Tax=mine drainage metagenome RepID=T0ZGI0_9ZZZZ
Glycosyltransferase {ECO:0000313|EMBL:EQD28845.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycosyl transferase
rifcsplowo2_01_scaffold_10897_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

12193..14190
DNA (1998bp) protein (666aa)
Striated muscle preferentially expressed protein kinase n=1 Tax=Clonorchis sinensis RepID=G7Y5N7_CLOSI
Surface layer protein B (SlgB-2) Tax=CG_Pacearch_03
Surface layer protein B SlgB-2
rifcsplowo2_01_scaffold_10897_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14254..15369
DNA (1116bp) protein (372aa)
small GTP-binding protein; K06944 Tax=CG_Woesearch_02
GTP-binding protein id=5799709 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
small GTP-binding protein
rifcsplowo2_01_scaffold_10897_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15361..16266)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003753E03
ATP binding protein Tax=CG_Woesearch_02
ATP binding protein
rifcsplowo2_01_scaffold_10897_16
unknown

Not on your lists

16356..16481
DNA (126bp) protein (42aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10897_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

16514..16906
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQA6_THELI
hypothetical protein; K09738 hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_10897_18
unknown

Not on your lists

16976..17992
DNA (1017bp) protein (339aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10897_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(17985..18440)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON id=5103729 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_10897_20

Not on your lists

comp(18490..20133)
DNA (1644bp) protein (548aa)
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation initiation factor aIF-2
rifcsplowo2_01_scaffold_10897_21
unknown

Not on your lists

20250..20618
DNA (369bp) protein (123aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10897_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

20664..21725
DNA (1062bp) protein (354aa)
N(2),N(2)-dimethylguanosine tRNA methyltransferase; K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=AR11
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA N2,N2-dimethyl(Guanine26-N2)-methyltransferase
rifcsplowo2_01_scaffold_10897_23
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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21760..22524
DNA (765bp) protein (255aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase {ECO:0000313|EMBL:ACS33470.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACS33470.1};; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; T
Serine/threonine protein kinase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5F8_THEGJ
rifcsplowo2_01_scaffold_10897_24

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comp(22531..22809)
DNA (279bp) protein (93aa)
Elongation factor 1-beta n=2 Tax=Methanobacterium RepID=K2RST2_METFO id=5103134 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-beta
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=157937
rifcsplowo2_01_scaffold_10897_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23039..24136)
DNA (1098bp) protein (366aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA 3'-terminal phosphate cyclase Tax=AR15
rifcsplowo2_01_scaffold_10897_26
unknown

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comp(24179..24439)
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10897_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(24520..26280)
DNA (1761bp) protein (587aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5799954 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_10897_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

26557..26880
DNA (324bp) protein (108aa)
putative membrane-associated protein/domain protein Tax=CG_Woesearch_02
Putative membrane-associated protein/domain protein id=5799953 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Displaying 28 items

View Taxonomy