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rifcsplowo2_01_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_263_1
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..668)
DNA (666bp) protein (222aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AKB48228.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AKB48228.1};; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMH4_METAC
rifcsplowo2_01_scaffold_263_2
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(718..1290)
DNA (573bp) protein (191aa)
anthranilate synthase / indole-3-glycerol phosphate synthase (EC:4.1.3.27)
AER446Wp; K01656 anthranilate synthase / indole-3-glycerol phosphate synthase [EC:4.1.3.27 4.1.1.48] id=5240919 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PabA protein {ECO:0000313|EMBL:KKR78903.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
rifcsplowo2_01_scaffold_263_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1287..2822)
DNA (1536bp) protein (512aa)
anthranilate synthase component I (EC:4.1.3.27)
anthranilate synthase component I; K01657 anthranilate synthase component I [EC:4.1.3.27] id=5240918 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
anthranilate synthase component I; K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=AR10
rifcsplowo2_01_scaffold_263_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3132..3527)
DNA (396bp) protein (132aa)
hypothetical protein; K07581 hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
exosome subunit; K07581 hypothetical protein id=5048514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome subunit
rifcsplowo2_01_scaffold_263_5

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3579..4244
DNA (666bp) protein (222aa)
Integrase catalytic region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN14_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:AKA49290.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
integrase catalytic subunit
rifcsplowo2_01_scaffold_263_6

Not on your lists

4593..5609
DNA (1017bp) protein (339aa)
Dehydrogenase (Flavoprotein) {ECO:0000313|EMBL:EKD56846.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dehydrogenase (flavoproteins) id=87266 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
flavin-dependent dehydrogenase
rifcsplowo2_01_scaffold_263_7
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(5606..6685)
DNA (1080bp) protein (360aa)
Polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=CG_CPR04_01
Putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPS) n=1 Tax=uncultured archaeon RepID=D1JFP7_9ARCH id=129509 bin=ACD7 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Polyprenyl synthetase
rifcsplowo2_01_scaffold_263_8

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comp(6660..7604)
DNA (945bp) protein (315aa)
Small subunit ribosomal protein S1, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:KHO49716.1}; EC=1.17.1.2 {ECO:0000313|EMBL:KHO49716.1};; Flags: Fragment;; TaxID=1579371 specie
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=5048457 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
rifcsplowo2_01_scaffold_263_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7630..8493)
DNA (864bp) protein (288aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VI78_CLOBI
4-diphosphocytidyl-2C-methyl-D-erythritol kinase
rifcsplowo2_01_scaffold_263_10
unknown

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8579..8932
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_263_11
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(8898..10061)
DNA (1164bp) protein (388aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=5090670 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:KKR78760.1}; Flags: Fragment;; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacte
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
rifcsplowo2_01_scaffold_263_12
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10125..11276)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W088_CLOBI rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000313|EMBL:KKR78761.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase
rifcsplowo2_01_scaffold_263_13
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(11273..11737)
DNA (465bp) protein (155aa)
acetyltransferase (EC:2.3.1.-) id=18248089 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
N-acetyltransferase GCN5 Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
N-acyltransferase
rifcsplowo2_01_scaffold_263_14
unknown

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comp(11747..11866)
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsplowo2_01_scaffold_263_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(11859..12116)
DNA (258bp) protein (86aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_01_scaffold_263_16
AR6, Pacearchaeaota, DPANN, Archaea

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12222..12536
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B1020
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_01_scaffold_263_17
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(12539..13132)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YQV7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKG91660.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
rifcsplowo2_01_scaffold_263_18
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(13134..14189)
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IPJ6_THEET
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase {ECO:0000313|EMBL:KKR78762.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
rifcsplowo2_01_scaffold_263_19
AR17, Woesearchaeaota, DPANN, Archaea

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comp(14210..14635)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Cenarchaeum symbiosum RepID=O74050_CENSY id=5103566 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_263_20

Not on your lists


14770..15582
DNA (813bp) protein (271aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsplowo2_01_scaffold_263_21
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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15631..16800
DNA (1170bp) protein (390aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
rplP0; acidic ribosomal protein P0
rifcsplowo2_01_scaffold_263_22

Not on your lists

16836..17141
DNA (306bp) protein (102aa)
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl12p; 50S ribosomal protein L12
rifcsplowo2_01_scaffold_263_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17180..18037
DNA (858bp) protein (286aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
hypothetical protein id=5049220 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_263_24
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(18038..18223)
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLF6_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
30S ribosomal protein S27
rifcsplowo2_01_scaffold_263_25
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(18226..18516)
DNA (291bp) protein (97aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rps24e; 30S ribosomal protein S24e
rifcsplowo2_01_scaffold_263_26
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(18522..18707)
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
DNA-directed RNA polymerase, subunit E
rifcsplowo2_01_scaffold_263_27
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(18704..19294)
DNA (591bp) protein (197aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_263_28
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(19332..19724)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_263_29
CG_Woesearch_02, Woesearchaeota, Archaea

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19974..21116
DNA (1143bp) protein (381aa)
hypothetical protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=CG_Woesearch_02
rRNA (Guanine-N(2)-)-methyltransferase id=5800237 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative RNA methylase
rifcsplowo2_01_scaffold_263_30
unknown

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21153..21443
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying items 1-30 of 92 in total

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