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rifcsplowo2_01_scaffold_5793

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5793_1
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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178..1869
DNA (1692bp) protein (564aa)
Peptidase, M48B family protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IWQ4_9CHRO
M48B family peptidase Tax=RBG_16_Micrarchaeota_36_9_curated
peptidase M48 Ste24p
rifcsplowo2_01_scaffold_5793_2
unknown

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comp(1885..2547)
DNA (663bp) protein (221aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5793_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2846..3916
DNA (1071bp) protein (357aa)
ampS; putative leucyl aminopeptidase (EC:3.4.11.-) Tax=AR11
Putative leucyl aminopeptidase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIM9_THEBM
leucyl aminopeptidase
rifcsplowo2_01_scaffold_5793_4
unknown

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comp(3905..4006)
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5793_5
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(4108..4860)
DNA (753bp) protein (251aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F633_9THEM
membrane complex biogenesis protein, BtpA family
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:AFK07386.1}; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.
rifcsplowo2_01_scaffold_5793_6

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5134..5475
DNA (342bp) protein (114aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:KHO46618.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KHO46618.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Peptidyl-tRNA hydrolase
rifcsplowo2_01_scaffold_5793_7
unknown

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5545..6069
DNA (525bp) protein (175aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5793_8
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6227..6625)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKZ2_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01905.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-
rifcsplowo2_01_scaffold_5793_9
unknown

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6813..6947
DNA (135bp) protein (45aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5793_10
Lactobacillus vaginalis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6987..8522
DNA (1536bp) protein (512aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1423814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
Aspartokinase n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ESS9_9LACO
aspartate kinase
rifcsplowo2_01_scaffold_5793_11

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8615..10276
DNA (1662bp) protein (554aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579371 species="Archaea.;" source=
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
rifcsplowo2_01_scaffold_5793_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10343..11398
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036185D0
hypothetical protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
hypothetical protein
rifcsplowo2_01_scaffold_5793_13
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(11427..12593)
DNA (1167bp) protein (389aa)
UPF0272 protein Desdi_2304 n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F9M6_DESDL rbh
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
rifcsplowo2_01_scaffold_5793_14
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12599..13351)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0U5_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO48698.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (str
rifcsplowo2_01_scaffold_5793_15
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(13320..14135)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000379B491
ExsB family protein; K06864 uncharacterized protein Tax=RBG_16_Caldithrix_48_16_curated
ExsB family protein
rifcsplowo2_01_scaffold_5793_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14140..14844)
DNA (705bp) protein (235aa)
urease accessory protein UreH n=1 Tax=Bacillus sp. 37MA RepID=UPI000380144C
high-affinity nickel-transporter Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
protein UreH
rifcsplowo2_01_scaffold_5793_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15028..15375
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
metalloprotease Tax=AR11
metalloprotease
rifcsplowo2_01_scaffold_5793_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15650..16732
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
alpha-L-glutamate ligase; K05844 ribosomal protein S6 modification protein Tax=CG_Woesearch_02
RimK family alpha-L-glutamate ligase
rifcsplowo2_01_scaffold_5793_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16729..17907)
DNA (1179bp) protein (393aa)
purA; adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridium RepID=D8GJE9_CLOLD
Adenylosuccinate synthetase Tax=AR11
rifcsplowo2_01_scaffold_5793_20
unknown

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comp(17979..18431)
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5793_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18541..19560
DNA (1020bp) protein (340aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] id=5045827 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=AR11
phosphoribosylaminoimidazolecarboxamide formyltransferase
rifcsplowo2_01_scaffold_5793_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19562..21031
DNA (1470bp) protein (490aa)
hypothetical protein Tax=AR11
seg id=5800568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
uncharacterized protein LOC101309702
rifcsplowo2_01_scaffold_5793_23

Not on your lists

21033..22160
DNA (1128bp) protein (376aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO51655.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
rifcsplowo2_01_scaffold_5793_24
unknown

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22168..23406
DNA (1239bp) protein (413aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5793_25
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

23403..24935
DNA (1533bp) protein (511aa)
GMP synthase, large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=uncultured bacterium RepID=K2CY36_9BACT
Displaying 25 items

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