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rifcsplowo2_01_scaffold_46231

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_46231_1

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3..884
DNA (882bp) protein (294aa)
Marine sediment metagenome DNA, contig: S01H1_S11974 {ECO:0000313|EMBL:GAG04093.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_46231_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(888..1310)
DNA (423bp) protein (141aa)
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
NMD3 family protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_46231_3
AR11, Woesearchaeaota, DPANN, Archaea

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1375..2004
DNA (630bp) protein (210aa)
hypothetical protein
Peptidase S26B, eukaryotic signal peptidase id=5799718 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsplowo2_01_scaffold_46231_4
AR11, Woesearchaeaota, DPANN, Archaea

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2043..2360
DNA (318bp) protein (106aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=AR11
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription-associated protein TFIIS
rifcsplowo2_01_scaffold_46231_5
unknown

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comp(2351..2803)
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_46231_6
CG_Woesearch_02, Woesearchaeota, Archaea

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2891..3121
DNA (231bp) protein (77aa)
UPF0235 protein MSWAN_0547 Tax=CG_Woesearch_02
UPF0235 protein MSWAN_0547 id=5799721 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein; K09131 hypothetical protein
rifcsplowo2_01_scaffold_46231_7
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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3185..4111
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DQ88_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAY17345.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
rifcsplowo2_01_scaffold_46231_8
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4112..4840)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBY5_AMMDK
Putative uncharacterized protein Tax=S_Thermoanaerobacterales_50_218
hypothetical protein
rifcsplowo2_01_scaffold_46231_9
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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4934..5353
DNA (420bp) protein (140aa)
dTMP kinase (EC:2.7.4.9)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=5241644 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative thymidylate kinase {ECO:0000313|EMBL:KKP27107.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
Displaying 9 items

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