ggKbase home page

rifcsplowo2_01_scaffold_16427_8

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_81

near complete RP 37 / 55 MC: 7 BSCG 7 / 51 ASCG 35 / 38 MC: 2
Location: comp(4869..5885)

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 356.0
  • Bit_score: 244
  • Evalue 2.40e-61
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 337.0
  • Bit_score: 243
  • Evalue 3.80e-61
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 395.0
  • Bit_score: 176
  • Evalue 1.60e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 1017
ATGCACAAACTAAAGCAGATTCCGGAAGACTTTATTGTGAAGGAGATAAGCCACCCGATTATTGACAATAACGGCCAATACGCTTATTTCTTATTAAGGAAAAAAAATTACAATACTCTGGATGCTGCAAGAAAAATCGCGGACAAGCTAAGAATCAAAGAAAAAAACATCGGCTTTGCAGGCAGCAAGGACAGGAATGCAGTAACAGAGCAGAAAATATCAGTTTTCAGGGGAAAAAAGGATTTTGAGAATATCAATTTTAAGGATATTGAGTTAAAATACCTAGGCAGCGGGAATGAGCCAATTTCTTTAGGCGATTTGGAAGGCAACGAGTTTGAGATAACAATAAGAAATTTAAGCAATAATGAAGCCAGTAAAATCAGAAATTCAGAAGGCAAAAAAATCCTGATGCCCAATCTTTTCGGTCCCCAGAGATTCAGCAAAAGCAACCATCTGGTCGGGAAGGCAATAATAAAAAAAGACTTTAAGAAAGCAGTAGAATTAATTTTAGAAAGCAACAATGATTTTAGCAATGAAATAAATGAGCACTTAAGAAAACATAAAAATGATTTTGTCGTGGCATTGAAGAAAGTCCCACTAAAATTAGTGAGATTATATGTTCATTCCTACCAGTCTTTTATTTTTAACGAAACAATAAGGCAGTTTTTGGGAAAAAACAATAAAAATTATTTAAAAAATAAAAATATAAAAATAAAAAATATTAAAACTCCTGTTGTTGGTTTTGGGACAATATTCAATAATAAAAAAATTGAGAAAATAATAAATAAAATAATGGAAAATGAAAAAATAACCCCAAGGGATTTCATAATAAAGGCAATACCCGAATTAAGCCAGGAAGGCGCTGAAAGGAAATTATTCATCCAAAATAAGGGGTTTAAGGTGATTGAGTTAGACAAAGATGAGCTAAATAAGGACAGAAATAAAATAAAAATAAGCTTTTCCCTGCCGAAAGGAAGCTATGCAACTGTTTTTGTTGAGAATTTATTCAGGAGCTAG
PROTEIN sequence
Length: 339
MHKLKQIPEDFIVKEISHPIIDNNGQYAYFLLRKKNYNTLDAARKIADKLRIKEKNIGFAGSKDRNAVTEQKISVFRGKKDFENINFKDIELKYLGSGNEPISLGDLEGNEFEITIRNLSNNEASKIRNSEGKKILMPNLFGPQRFSKSNHLVGKAIIKKDFKKAVELILESNNDFSNEINEHLRKHKNDFVVALKKVPLKLVRLYVHSYQSFIFNETIRQFLGKNNKNYLKNKNIKIKNIKTPVVGFGTIFNNKKIEKIINKIMENEKITPRDFIIKAIPELSQEGAERKLFIQNKGFKVIELDKDELNKDRNKIKISFSLPKGSYATVFVENLFRS*