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rifcsplowo2_01_scaffold_16427

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16427_1
unknown

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1..87
DNA (87bp) protein (29aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16427_2
CG_Woesearch_02, Woesearchaeota, Archaea

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90..473
DNA (384bp) protein (128aa)
hypothetical protein; K07163 Tax=CG_Woesearch_02
Zn-ribbon containing protein id=5800623 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Zn-ribbon containing protein
rifcsplowo2_01_scaffold_16427_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(474..1670)
DNA (1197bp) protein (399aa)
ychF; translation-associated GTPase; K06942 Tax=CG_Woesearch_02
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_16427_4
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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1912..2880
DNA (969bp) protein (323aa)
dihydrodipicolinate synthase ; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWA2_WOR_2_47_8_curated
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) id=14627104 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dihydrodipicolinate synthase (EC:4.2.1.52)
rifcsplowo2_01_scaffold_16427_5

Not on your lists

2950..3576
DNA (627bp) protein (209aa)
Marine sediment metagenome DNA, contig: S01H1_S18736 {ECO:0000313|EMBL:GAG26490.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
seg id=5041693 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_16427_6

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3778..4245
DNA (468bp) protein (156aa)
hypothetical protein
id=5103004 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62285.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_16427_7
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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4247..4879
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000313|EMBL:AKG91352.1}; EC=2.7.4.3 {ECO:0000313|EMBL:AKG91352.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" s
Adenylate kinase n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MVT3_9THEO
Adenylate kinase
rifcsplowo2_01_scaffold_16427_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(4869..5885)
DNA (1017bp) protein (339aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CG_Woesearch_01
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
rifcsplowo2_01_scaffold_16427_9
unknown

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comp(5936..6817)
DNA (882bp) protein (294aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16427_10
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6879..7853)
DNA (975bp) protein (325aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Woesearch_01
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=5045844 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
rifcsplowo2_01_scaffold_16427_11

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comp(8013..9728)
DNA (1716bp) protein (572aa)
DNA polymerase beta family {ECO:0000313|EMBL:KHO53091.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
PHP domain protein id=4935158 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PHP domain-containing protein
rifcsplowo2_01_scaffold_16427_12
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(9745..9954)
DNA (210bp) protein (70aa)
Tax=GWA2_WOR_2_47_8_curated
rifcsplowo2_01_scaffold_16427_13
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(9951..10724)
DNA (774bp) protein (258aa)
hypothetical protein
id=3230410 Tax=GWA2_WOR_2_47_8_curated
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
rifcsplowo2_01_scaffold_16427_14

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comp(10777..11214)
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53090.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NTP pyrophosphohydrolase
NUDIX hydrolase id=14427390 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rifcsplowo2_01_scaffold_16427_15
AR11, Woesearchaeaota, DPANN, Archaea

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11567..12082
DNA (516bp) protein (172aa)
Transcription factor E Tax=AR11
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
rifcsplowo2_01_scaffold_16427_16
unknown

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12126..12464
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16427_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(12536..13363)
DNA (828bp) protein (276aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
rifcsplowo2_01_scaffold_16427_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13424..14785
DNA (1362bp) protein (454aa)
Putative dihydrolipoamide dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP2_NITGG
dihydrolipoamide dehydrogenase
Putative dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:AFU59587.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
rifcsplowo2_01_scaffold_16427_19
unknown

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comp(14787..15464)
DNA (678bp) protein (226aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16427_20
AR11, Woesearchaeaota, DPANN, Archaea

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comp(15452..17515)
DNA (2064bp) protein (688aa)
Histone acetyltransferase Elp3 like protein n=2 Tax=Thermococcus RepID=C6A5G3_THESM id=5103697 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histone acetyltransferase, ELP3 family Tax=AR11
Histone acetyltransferase Elp3 like protein
rifcsplowo2_01_scaffold_16427_21
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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17672..19069
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000364773E
Uncharacterized protein {ECO:0000313|EMBL:EYT82562.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
nucleotidyltransferase
rifcsplowo2_01_scaffold_16427_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19093..21720)
DNA (2628bp) protein (876aa)
cation-transporting ATPase A (EC:3.6.3.10); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Woesearch_02
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5043592 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cation-transporting ATPase, E1-E2 family
rifcsplowo2_01_scaffold_16427_23
unknown

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comp(21774..21899)
DNA (126bp) protein (42aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16427_24
AR11, Woesearchaeaota, DPANN, Archaea

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comp(21902..22192)
DNA (291bp) protein (97aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsplowo2_01_scaffold_16427_25
AR11, Woesearchaeaota, DPANN, Archaea

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comp(22202..22369)
DNA (168bp) protein (56aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR11
rifcsplowo2_01_scaffold_16427_26
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(22724..23392)
DNA (669bp) protein (223aa)
Conserved hypothetical membrane protein, sodium/calcium exchanger family n=1 Tax=uncultured archaeon RepID=D1JFE6_9ARCH
Sodium/calcium exchanger protein {ECO:0000313|EMBL:AKB84964.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Metha
K+-dependent Na+/Ca+ exchanger related-protein
rifcsplowo2_01_scaffold_16427_27
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(23349..23741)
DNA (393bp) protein (131aa)
Sodium/calcium exchanger protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPA6_METAC
Sodium/calcium exchanger protein {ECO:0000313|EMBL:AKB29215.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methano
sodium/calcium exchanger protein
rifcsplowo2_01_scaffold_16427_28

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23829..24683
DNA (855bp) protein (285aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1457870 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_16427_29
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(24686..25525)
DNA (840bp) protein (280aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_01
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L11
rifcsplowo2_01_scaffold_16427_30
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

25873..26793
DNA (921bp) protein (307aa)
ribonuclease HII (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BK77_9BACT
hypothetical protein; K01163 hypothetical protein Tax=GWC2_OP9X_49_35_curated
Displaying items 1-30 of 34 in total

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