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rifcsplowo2_01_scaffold_6359

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6359_1
CG_Woesearch_03, Woesearchaeota, Archaea

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3..629
DNA (627bp) protein (209aa)
alaS; alanine--tRNA ligase/alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Woesearch_03
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5048640 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
alanyl-tRNA synthetase
rifcsplowo2_01_scaffold_6359_2
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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661..1086
DNA (426bp) protein (142aa)
Putative Mg(2+) transporter n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6I5_AZOSB
putative Mg(2+) transporter
Putative Mg(2+) transporter {ECO:0000313|EMBL:CAL94440.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH
rifcsplowo2_01_scaffold_6359_3
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(1078..1779)
DNA (702bp) protein (234aa)
Tax=CG_Pacearch_04
rifcsplowo2_01_scaffold_6359_4
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1853..2182
DNA (330bp) protein (110aa)
Export-related chaperone CsaA n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYW9_EMTOG
export-related chaperone CsaA
Export-related chaperone CsaA {ECO:0000313|EMBL:AFK04872.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strai
rifcsplowo2_01_scaffold_6359_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2207..2740)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816AF2
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_6359_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2799..4016)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_6359_7

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comp(4055..4789)
DNA (735bp) protein (245aa)
Phosphoenolpyruvate synthase (Pps, ppsA) {ECO:0000313|EMBL:AIF00814.1}; EC=2.7.9.2 {ECO:0000313|EMBL:AIF00814.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncul
Uncharacterized protein n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9YG75_AERPE
hypothetical protein
rifcsplowo2_01_scaffold_6359_8

Not on your lists

comp(4791..6188)
DNA (1398bp) protein (466aa)
Phosphoenolpyruvate synthase id=2720276 bin=GWA1_ZB2_49_26 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:KKW13837.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
phosphoenolpyruvate synthase
rifcsplowo2_01_scaffold_6359_9
R_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

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comp(6175..6786)
DNA (612bp) protein (204aa)
Metal-dependent phosphohydrolase HD sub domain-containing protein id=3999677 bin=GWF2_Planctomycetes_50_10 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
HD superfamily hydrolase Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_36_11_curated
metal-dependent phosphohydrolase HD sub domain-containing protein
rifcsplowo2_01_scaffold_6359_10
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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6884..7639
DNA (756bp) protein (252aa)
Homoserine dehydrogenase id=3999680 bin=GWF2_Planctomycetes_50_10 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
transcriptional regulator TrmB Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_6359_11
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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comp(7636..8658)
DNA (1023bp) protein (341aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YM04_9BACT
Phosphoenolpyruvate synthase
rifcsplowo2_01_scaffold_6359_12
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(8684..10177)
DNA (1494bp) protein (498aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
rifcsplowo2_01_scaffold_6359_13

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10352..11089
DNA (738bp) protein (246aa)
transcriptional regulator TrmB id=18248243 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO48246.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_6359_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11136..12173
DNA (1038bp) protein (346aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Woesearch_02
id=5102933 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_6359_15
unknown

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12337..12672
DNA (336bp) protein (112aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_16

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13025..13390
DNA (366bp) protein (122aa)
response regulator receiver protein id=5045992 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Response regulator receiver protein {ECO:0000313|EMBL:KHO45802.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator
rifcsplowo2_01_scaffold_6359_17
AR4, Woesearchaeaota, DPANN, Archaea

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13390..14853
DNA (1464bp) protein (488aa)
signal transduction histidine kinase LytS id=5045991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
signal transduction histidine kinase LytS Tax=AR4
multi-sensor signal transduction histidine kinase
rifcsplowo2_01_scaffold_6359_18
unknown

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comp(15238..15441)
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_19

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comp(15504..16448)
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM67835.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transposase, IS4 family protein/SWIM domain fusion id=5044440 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
transposase family protein
rifcsplowo2_01_scaffold_6359_20
unknown

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16541..16699
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_21
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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16775..17497
DNA (723bp) protein (241aa)
Glycosyltransferase n=2 Tax=Vibrio tubiashii RepID=F9T8U5_9VIBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJR06056.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbuli
rifcsplowo2_01_scaffold_6359_22
unknown

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comp(17516..17623)
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_23
unknown

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comp(17683..17850)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_24
AR11, Woesearchaeaota, DPANN, Archaea

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comp(17883..21374)
DNA (3492bp) protein (1164aa)
Chromosome partition protein Smc Tax=AR11
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_6359_25
unknown

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comp(21361..21525)
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_26
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(21657..22403)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719623
Zinc/iron permease {ECO:0000313|EMBL:KKP38661.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
rifcsplowo2_01_scaffold_6359_27
unknown

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22528..23079
DNA (552bp) protein (184aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_28
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(23180..23827)
DNA (648bp) protein (216aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ribonuclease
rifcsplowo2_01_scaffold_6359_29
unknown

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24082..24420
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6359_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24365..24880)
DNA (516bp) protein (172aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridiales RepID=G9YP94_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM52886.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
GNAT family acetyltransferase protein
Displaying items 1-30 of 35 in total

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