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rifcsplowo2_01_scaffold_16879

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16879_1

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comp(3..857)
DNA (855bp) protein (285aa)
Parallel beta-helix repeat protein id=5800154 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Parallel beta-helix repeat protein {ECO:0000313|EMBL:AJF61485.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_16879_2
unknown

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1112..1213
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16879_3
GWA2_OD1_41_14_partial, Falkowbacteria, Parcubacteria, Bacteria

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comp(1254..2054)
DNA (801bp) protein (267aa)
High-affinity iron transporter {ECO:0000313|EMBL:KKR91711.1}; TaxID=1618635 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWA2_41_14.;"
High-affinity iron transporter id=3682513 bin=GWB1_CP_36_13 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
high-affinity iron transporter
rifcsplowo2_01_scaffold_16879_4
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(2274..2678)
DNA (405bp) protein (135aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=5240572 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cytochrome C oxidase subunit II Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsplowo2_01_scaffold_16879_5

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2773..3819
DNA (1047bp) protein (349aa)
ote:Oter_0785 quinolinate synthetase complex, A subunit (EC:2.1.1.63); K03517 quinolinate synthase [EC:2.5.1.72] id=68486 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
quinolinate synthase (EC:4.1.99.- 2.5.1.72)
rifcsplowo2_01_scaffold_16879_6

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comp(3816..6947)
DNA (3132bp) protein (1044aa)
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:KHO51441.1}; EC=6.1.1.5 {ECO:0000313|EMBL:KHO51441.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_16879_7
unknown

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7051..7554
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16879_8

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7580..9907
DNA (2328bp) protein (776aa)
sat:SYN_02439 phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] id=96372 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Uncharacterized protein {ECO:0000313|EMBL:KKM60657.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_16879_9

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9900..10190
DNA (291bp) protein (97aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] id=5043651 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KKM98997.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
5,10-methenyltetrahydrofolate synthetase
Displaying 9 items

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