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rifcsplowo2_01_scaffold_16971

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16971_1
unknown

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comp(1..111)
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16971_2

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215..1699
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
Uncharacterized protein {ECO:0000313|EMBL:KHO51189.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein
rifcsplowo2_01_scaffold_16971_3
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(1696..2727)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=CG_Pacearch_05
tRNA wybutosine-synthesizing protein 1-like protein; K15449 tRNA wybutosine-synthesizing protein 1 id=5050144 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-modifying protein
rifcsplowo2_01_scaffold_16971_4

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comp(2749..3468)
DNA (720bp) protein (240aa)
Diphthamide synthase subunit DPH2 {ECO:0000313|EMBL:KHO55433.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Diphthamide biosynthesis enzyme Dph2 id=5799580 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_16971_5

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comp(3462..3734)
DNA (273bp) protein (91aa)
Diphthamide synthase subunit DPH2 {ECO:0000313|EMBL:KHO55434.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Diphthamide synthase, subunit DPH2 id=5799798 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
diphthamide biosynthesis protein
rifcsplowo2_01_scaffold_16971_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3779..4780)
DNA (1002bp) protein (334aa)
lrpC; Lrp/AsnC family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
leucine-responsive regulatory protein 1; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5043670 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_16971_7

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4872..6044
DNA (1173bp) protein (391aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR58426.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
L-lysine 2,3-aminomutase id=2806031 bin=GWF1_Spirochaetes_51_8 species=Burkholderia cenocepacia genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
lysine 2,3-aminomutase
rifcsplowo2_01_scaffold_16971_8

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6083..7171
DNA (1089bp) protein (363aa)
Geranylgeranyl reductase {ECO:0000313|EMBL:KHO52405.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
geranylgeranyl reductase id=5050661 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Geranylgeranyl reductase
rifcsplowo2_01_scaffold_16971_9
unknown

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7168..7266
DNA (99bp) protein (33aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16971_10
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

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7355..8566
DNA (1212bp) protein (404aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curate
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJR2_THEM7
rifcsplowo2_01_scaffold_16971_11
Entamoeba invadens, Entamoeba, Eukaryota

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8591..9493
DNA (903bp) protein (301aa)
Serine-threonine protein kinase, putative {ECO:0000313|EMBL:ELP85658.1}; EC=2.7.10.2 {ECO:0000313|EMBL:ELP85658.1};; TaxID=370355 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;"
serine-threonine protein kinase, putative n=1 Tax=Entamoeba invadens IP1 RepID=UPI0002C3FBBA
rifcsplowo2_01_scaffold_16971_12
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9541..10065
DNA (525bp) protein (175aa)
protein kinase (EC:2.7.11.1) Tax=GWA2_Deltaproteobacteria_45_12_curated
hypothetical protein
Displaying 12 items

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