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rifcsplowo2_01_scaffold_12375

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12375_1
AR19, Pacearchaeaota, DPANN, Archaea

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361..1509
DNA (1149bp) protein (383aa)
MscS Mechanosensitive ion channel n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L150_9EURY id=5103804 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
MscS mechanosensitive ion channel Tax=AR19
MscS Mechanosensitive ion channel
rifcsplowo2_01_scaffold_12375_2
CG_Woesearch_02, Woesearchaeota, Archaea

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1762..3033
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D30C4
integrase Tax=CG_Woesearch_02
integrase
rifcsplowo2_01_scaffold_12375_3
unknown

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comp(3169..3525)
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_4
unknown

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comp(3522..3659)
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_5

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4213..5022
DNA (810bp) protein (270aa)
Marine sediment metagenome DNA, contig: S06H3_S20504 {ECO:0000313|EMBL:GAI53024.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_12375_6
unknown

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5153..5329
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_7

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comp(5326..5814)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL25519.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase/recombinase y4qK id=5098578 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
phage integrase
rifcsplowo2_01_scaffold_12375_8
unknown

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comp(6095..6361)
DNA (267bp) protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_9
unknown

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comp(6358..6597)
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_10
unknown

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comp(6731..7027)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000382EB07
rifcsplowo2_01_scaffold_12375_11
unknown

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comp(7024..7209)
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_12
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

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comp(7206..9098)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E243_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein
rifcsplowo2_01_scaffold_12375_13
unknown

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comp(9095..9346)
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_14
unknown

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9975..10787
DNA (813bp) protein (271aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12375_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11065..12054
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU99_METHJ
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_12375_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12487..13101
DNA (615bp) protein (205aa)
hypothetical protein Tax=AR11
Uncharacterised protein family UPF0153 id=5799564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_12375_17
GWA1_OP11_48_10_plus, Microgenomates, Bacteria

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comp(13093..13758)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000370BF1A
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:KKU90344.1}; TaxID=1618496 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_48_10.;"
G-D-S-L family lipolytic protein
rifcsplowo2_01_scaffold_12375_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13772..14545)
DNA (774bp) protein (258aa)
enoyl-(acyl-carrier-protein) reductase (NADH); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=AR11
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E5T5_FLESM
Displaying 18 items

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